Oncorhynchus tshawytscha (Chinook salmon): 112230294
Help
Entry
112230294 CDS
T05605
Name
(RefSeq) mitochondrial Rho GTPase 1-A isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112230294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112230294
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
otw04031
]
112230294
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
112230294
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
112230294
GTP-binding proteins [BR:
otw04031
]
Small (monomeric) G-proteins
Rho Family
Miro
112230294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
Arf
PduV-EutP
EF-hand_1
EF-hand_7
RsgA_GTPase
MMR_HSR1
AAA_22
MCM
Dynamin_N
ABC_tran
AAA
AAA_29
nSTAND1
FeoB_N
EF-hand_4
EF-hand_8
AAA_25
AAA_5
Motif
Other DBs
NCBI-GeneID:
112230294
NCBI-ProteinID:
XP_024252295
LinkDB
All DBs
Position
LG32:11335727..11367206
Genome browser
AA seq
661 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMSLVSEEFPQVVPYRAEEITIPADVTPERVPTHIVDYSE
AEQTDEQLSSEISKANVICIVYAVNNKKSIEKVTSHWIPLINDNTDKDSRVPVILVGNKS
DLVEHSSMETILPVMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKQ
MKPACIKALTRIFKVSDLDNDGILNDNELNFFQRTCFNAPLVSQALEDVKNVVRKNMIDG
VCDNGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELHQDYLFPLTLKVPPDCTT
ELNHNAYLFLQSVFDKHDKDRDCALSPEELKDLFDVFPYMPWGPDVNNTVCTNDEGWITY
QGYLSQWTLTTYLDVQRCLEYLGYLGYSIISEQESQAVAITVTRDKKIDLQKKQTQRSVF
RCNVFGDSGSGKSGFLQAFLGRNLTRQNTVSEEHMSYYAISTAYVYGQEKYLLLHEVFPD
FDVLSDTDLACDIVCLVYDASNPHSFEYCARVFKQYFMDTKTPCMMIAAKSDLQEAKQLY
ALTPLEFCRKHKMPPPQAFTCNTADAPCKDIYTKLTTMAMHPHARLRCMCTCNRCTFCHL
QNFINSELVQTVKAKLYTAILSRHVTQADLKSSTFWLRVSAGATVFAVLGFAMYRVLLKQ
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaggacgtcagaatattactggtgggggagcccaaggtggggaagacttccctg
atcatgtccctggtcagcgaggagttcccacaggtggtgccctaccgggctgaagagatc
accataccggcagacgtcaccccagagagagttcctacacacatagtagactactcagag
gcggaacaaacagatgagcagttgtcttcagagatatcgaaggccaatgtgatttgcata
gtgtacgccgtcaacaacaagaagtccattgagaaggtgaccagccattggattccactt
ataaatgacaatacagacaaggacagcagggttcctgtcatcctggtcgggaacaagtct
gacctggtggaacacagcagcatggagaccatcctgcctgtcatgaaccagtacactgag
atagagacatgtgtggagtgttcagcaaagaacctgaagaacatatctgagttgttttac
tacgcccaaaaggctgtcctgcaccccactggccctttatactgtccagaggagaaacag
atgaagcctgcttgcatcaaagcgctgacacgcatcttcaaggtgtcagacctggacaac
gatgggattctcaatgataacgagctcaacttcttccagaggacatgcttcaatgcccca
ctggtatcccaggccctggaggatgtgaagaacgttgtgaggaagaatatgatcgatggt
gtgtgtgacaacggcctcactctcaaagggttcctgttcctccacaccctcttcatccag
agggggagacatgagaccacctggacggtcctcaggaggttcggctacgatgacgacctg
gaactccaccaggactacctgttcccactcacgttgaaagtacctccagactgcaccact
gagctgaatcacaatgcctacctcttcctccagagtgtctttgacaaacatgacaaggac
cgggactgtgccctgtccccagaggagctgaaggacctgtttgacgtgttcccctacatg
ccctggggtcccgacgtcaacaacacggtgtgcaccaatgacgaaggctggatcacctac
cagggctacctgtcccagtggacgttgaccacctacctggatgtccagcgctgcctggag
tacctgggttaccttggttactccatcatctctgagcaggagtcccaggcagtggccatc
acagtgacgagggacaagaagattgacctgcagaagaagcagacccagcgcagtgtgttc
cgctgtaacgtcttcggggacagcggcagtggcaaaagtggcttcctgcaagccttcctc
ggaagaaacctcacgcgtcaaaacactgttagcgaagagcacatgtcctactatgctatc
agcacagcatatgtgtatggtcaggagaaatacctactgctccacgaggtcttcccggac
tttgacgtcctctcggacactgacctggcttgtgacattgtgtgtctggtgtacgacgcc
agcaacccccactccttcgagtactgcgccagagtcttcaagcagtacttcatggacacc
aagacgccgtgcatgatgatcgctgccaagtcggacctccaggaggccaagcagctctac
gccctcacccctctggagttctgtaggaagcacaagatgccccctccgcaggccttcacc
tgcaacacggcagacgcaccctgcaaagacatctacaccaaactcaccaccatggccatg
caccctcacgctcggctgcgctgtatgtgtacctgtaacaggtgcaccttctgccacctg
cagaacttcatcaactcagagctggtgcagacggtgaaggccaagctctacaccgctatt
ctcagcagacatgtgacacaggctgacttgaagagctccaccttctggttgagagtgagc
gcgggagccactgtgttcgccgtgctgggattcgccatgtacagagtgctgctcaaacaa
cggtga
DBGET
integrated database retrieval system
