Oncorhynchus tshawytscha (Chinook salmon): 112230295
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Entry
112230295 CDS
T05605
Name
(RefSeq) rhomboid-related protein 3-like isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112230295
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
112230295
Peptidases and inhibitors [BR:
otw01002
]
Serine peptidases
Family S54: Rhomboid family
112230295
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_5
EF-hand_11
AIF-1
EF-hand_9
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
112230295
NCBI-ProteinID:
XP_024252298
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Position
LG32:11369607..11423645
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AA seq
408 aa
AA seq
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MPDASRDVPVHSSPAVAANAEGDEIEVLESIDVLPVAPEDQWKSLFDKFDSESSGFISTE
RFRDLLVAHGSELDPHKLEVLLALADGNADGKICYQDFVNLMSNKRSNSFRRAILQGGRQ
LKGAGALGEEVGLGLSQRLVRHIAYETLPREIDRKWYFDSYTCCPPPWLILAITIAEVAV
FMYYGLQLDRWVLQVSSPHFLRGPLPYHPQLRIQAWRYLSYAFMHAGIEHLGLNMAMQLL
VGVPLEMVHGALRIGLVYVCGVLAGSLAVSVTDMTAPVVGSSGGVYALVSAHLANVVMNW
SGMKCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAFPPCPNPSFVAHLGGVMVGLTLGVV
VLQNYEQRLQEQSLFWIFFSVYFLFVLCAVFWNVFAYSLLDVRLPPTP
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcgtctcgggacgtgccggtgcattcctctccagcagtggcagcgaacgcg
gagggagacgagatagaagtgctggagagtatcgatgtccttcccgtggccccagaggac
caatggaaatctctgttcgacaagttcgactcagagagttcaggcttcatcagtacagag
cggttcagagacctgctggtggcccacggctcggagctggaccctcacaagctggaggtt
ctattggccctcgccgacggcaacgcggacggaaagatctgctaccaggactttgtcaac
ctgatgtccaacaagcgcagcaacagcttccggcgggccatcctccaggggggtcgtcag
ttgaagggggccggggccctgggggaggaggtgggtctgggtctgtcccagaggctggtg
aggcacatcgcctatgagaccctgccccgggagatcgacaggaagtggtacttcgacagc
tacacctgctgtccaccaccctggctcatcctggcgatcaccatcgctgaggtggcagtg
ttcatgtactatggcctgcagttggaccgctgggtgctgcaggtgtccagtccccacttc
ctgaggggcccactgccctaccacccccagctacggattcaggcctggagatacctcagc
tatgccttcatgcacgcagggatagaacacctgggtctgaacatggccatgcagctgctg
gtgggagtccctcttgagatggtccatggagcgctgaggataggactggtctacgtgtgt
ggcgtactggcaggctccctggccgtgtctgtcactgatatgactgctccggtggtgggg
tcgtctggaggagtctacgccctggtctcagcacacctggccaacgtcgtcatgaactgg
tcgggtatgaaatgtcagtttaagctgttccggatggccatggctctggtctgcatgagt
gtggagttcggccgtgccgtgtggctgcggttctacccgccggccttcccgccctgcccc
aaccccagctttgtggcccacctggggggtgtgatggtggggctcaccctgggggttgta
gtcctccagaactacgagcagcgtctccaagagcagtctctattctggatcttcttctcc
gtctacttcctctttgtcctctgtgctgtcttctggaacgtcttcgcctacagcctgctg
gacgtccggctcccccccacgccgtga
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