Oncorhynchus tshawytscha (Chinook salmon): 112230306
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Entry
112230306 CDS
T05605
Symbol
rab11fip4a
Name
(RefSeq) rab11 family-interacting protein 4A isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112230306 (rab11fip4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112230306 (rab11fip4a)
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
112230306 (rab11fip4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_1
EF-hand_9
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
112230306
NCBI-ProteinID:
XP_024252308
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Position
LG32:11116935..11204277
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AA seq
685 aa
AA seq
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MAPSASVFKSGFQPQDNKPPMESVLPDPEQLLLFLRKLKEVFDVCDEDSDGFIRVEHFVD
LGSQFGQGDEVKKLAKCLDPNAQGRINFKEFCHGVLAIKGCEGVLKTTLGARSITRRPYE
TDNGYYYQRGDKALAQPVIMCTRVSVNPEPGCHLFPEGEEEGEVEGRERAELDMDSAVES
NPGSDVSEGERSGVDKEDGPGGLFFPGDKCSQLNPSVTSDLSTRSSASLNEEQFEDYGEG
EDVDYTPSSPCPEDETRTNGYSDLGSSVPSSAGQTPRKTRHLYNNEMMDVYCSQCCKKVN
LLNDLEARLKNLKANSPNRKISSTAFGRQLLHTSNFSSSNGSTEDLFRDSIDSCDIDITE
KVSYLEKKVAELENDTLMNGDLKSKLKQENTQLVHRVHELEEQLKDQEARAEQNTEEEQR
RHREAYSKMERDKNTELELLHNRVQQLEEENGDISVNMCRLKSQTEKLDEEKQRMTDKLE
DTSLRLKDEMDLYRKMMDKLRQNRHEFQKEREAMQELIEDLRRELEHLQLFKLETEKPGR
GRSSSSGLTEFNAKTREMELEHEVKRLKQRFVSQDFPLTSDLRHLVVSAGARLRHGQTEN
LKLREQNDDLNGQILSLSLYEAKNLFATQTKAQSLAAEIDNASRDDLMEALKEQEEINFR
LRQYMDKIILSILDHNPSILEIKTN
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcgccctctgcttcagtgttcaagtcgggttttcaacctcaggacaacaaacctccg
atggaaagtgtacttcccgacccggagcagctattgttgttcctcagaaaactcaaagag
gtgttcgacgtgtgcgacgaggattcggatggtttcattcgcgtggagcatttcgtagac
ctcggttcacagttcggccaaggagacgaggtgaagaagttggccaaatgcttggacccc
aatgctcagggcaggatcaacttcaaggaattctgccatggagtgctggctatcaaaggc
tgtgagggggtcctgaagaccacactgggagctcgcagtatcacacggcgtccctatgag
actgacaacggttactactaccagcgtggtgacaaagcgcttgcacagccggtcatcatg
tgcacgcgggtgtccgttaaccccgagcctgggtgccatctattcccagagggagaggag
gaaggagaggtggagggcagagagagggcagagttagacatggacagtgctgtggagagc
aacccgggatcagatgtctctgaaggggagaggagcggagtagacaaagaggatggaccg
gggggacttttctttcctggagacaagtgcagtcagctaaacccatcggtgacctctgac
ctgtcgacgcgttcctctgcctctctgaacgaggagcagtttgaggactacggagaggga
gaggacgtggactacactcccagcagcccctgccccgaggacgagacgcgcaccaacggc
tactctgacctgggctcctctgtaccctccagtgctggccagaccccaaggaagacacgt
cacctgtacaacaatgagatgatggacgtgtactgttcccagtgctgtaagaaggtcaac
ctactcaacgacctggaggccaggctgaagaacctcaaagccaacagccccaataggaaa
atctccagcacagcctttggcaggcagctcctccacaccagtaacttcagcagcagcaac
ggcagcacggaggacctgttccgagacagcattgactcctgtgacatcgacatcactgag
aaggtgagttacctagagaagaaggtagcagagttggagaatgatacgctgatgaacgga
gatctcaagtccaagctgaagcaggagaacacacagctggttcacagggtccacgagttg
gaggagcagttgaaggaccaggaggcgcgggcagagcagaacacagaggaggagcagaga
cgacaccgtgaggcctacagcaagatggagagagacaagaacactgagctagagctgcta
cacaaccgagtccaacagctagaggaggagaacggggatatatcggtgaacatgtgcaga
ctgaagtctcagacagagaaactggacgaggagaagcagcgtatgacagacaagctggag
gacaccagtctgaggctaaaggatgagatggacctctacaggaagatgatggacaagctg
aggcagaacagacacgagttccagaaggagagggaggccatgcaggagttgattgaggac
cttcgtcgggagctggagcacctgcagctgttcaaactggagacagagaagcctggccgc
ggccgcagctcctcatctgggctgacggagttcaacgccaagaccagagagatggagctg
gagcacgaggtcaagagactcaaacagcggtttgtctcgcaggactttcctctgacctct
gacctccgccacctcgtagtatccgctggggcacgcctccgtcacggtcagacggagaac
ctgaaactgagggaacagaacgacgacctgaatggtcagatcctcagtctgagtctgtat
gaggctaagaacctgtttgctacccagaccaaggcccagtcgctggctgccgagatagac
aatgcctcacgagacgacttgatggaggccctcaaggagcaggaggagatcaacttccgt
ttgcggcagtacatggacaagataattttgtctatcctggaccacaacccctccatcttg
gagatcaagaccaactag
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