Oncorhynchus tshawytscha (Chinook salmon): 112230311
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Entry
112230311 CDS
T05605
Name
(RefSeq) neuronal pentraxin-1
KO
K25709
neuronal pentraxin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
112230311
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Gene cluster
GFIT
Motif
Pfam:
Pentaxin
Laminin_G_3
DUF16
SlyX
Laminin_G_2
DUF6674
HEAT_ULK4
Hrs_helical
DUF848
Motif
Other DBs
NCBI-GeneID:
112230311
NCBI-ProteinID:
XP_024252315
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Position
LG32:complement(9465273..9471418)
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AA seq
432 aa
AA seq
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MPGNMPGIREGHSWQLFLLSFLVLEGSTQDFGQTQFICTSVPKDMDLCAATMQNSGPAED
LKTTVMQLRETVLQQKETIMNQKETIRELTSKLSRCESQSLPEAGAGGRRIVPGAKNTMG
DVSRGPQDTLAQLGQTLQTLKQRLENLEQYSRNNGTAQANSLKDLLQNKIDDMEKQVLSR
VNTLEETKPGQKNDTDQRNRVESTLTSVHHRITDLEKGGKDNRPLDKFQLTFPLRTNYMY
AKAKRTLPEMYAFTVCLWIKSNASPGVGTPFSYAVPGQANELVLIEWGNNPMEILINDKV
AKLPFIINDGKWHHIGITWTTRDGMWEAFQDGVLRGSGENLAPYHPIKPQGVLVLGQEQD
TLGGGFDATQAYVGELANLNMWDRKLSIGEIYNLATCNSKAQTGNVFSWSESNIEIFGGA
TKWTFEPCRALN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgccaggaaacatgcctggaatcagggagggacactcttggcaacttttcctactttct
ttcttggttttggaggggtcgacgcaagatttcggacagacccagtttatttgcacgtct
gtgcccaaggatatggacttgtgcgcggctacgatgcagaacagcggtccggcggaggac
ttgaagacgacagtgatgcaattgagggagaccgtgttacagcaaaaggagaccattatg
aaccaaaaggagacaatcagggaactaacgtccaagttgagcaggtgtgagagccagagt
ctgcccgaggcgggagcgggaggtcggagaatagtaccgggcgccaagaacactatgggg
gacgtatcaaggggtcctcaggacactctcgctcaactaggacagactttacagactctc
aaacagaggttggagaatcttgagcaatacagccgaaacaacggtacggcccaggcgaat
agtctgaaagacctgcttcagaacaagattgatgatatggagaagcaggtgctgtcccgg
gtcaacaccctggaggagaccaaaccgggtcagaagaacgatacggaccagcggaaccga
gtggagtccacgctgacttccgtgcatcaccggataacggacctagagaaaggtgggaaa
gacaacagaccgctggacaagttccagctgacattcccgttgagaaccaactacatgtac
gccaaagccaagagaaccctgccggagatgtatgccttcaccgtgtgtctgtggattaaa
tctaacgcgtcgcccggggtgggcacacctttctcctacgctgtcccagggcaggccaac
gagctggtgctgattgagtggggaaataacccgatggagatactcatcaatgataaggtg
gccaaattgccgttcatcatcaacgacgggaagtggcatcacatcggcatcacctggacc
acgcgcgacgggatgtgggaggcgtttcaggacggagtgctgcggggcagtggagagaat
ctggcgccataccatcccatcaagccgcagggggtcctcgtactgggacaagagcaggac
acgctggggggaggtttcgacgcgacacaagcttatgtgggtgagctagcaaatctcaac
atgtgggacaggaagctttccatcggggagatttataacctggcaacctgcaacagcaaa
gcgcaaactggcaacgtattctcttggtcggagtccaacattgaaatatttggtggcgct
accaagtggacattcgagccgtgccgtgcgctcaactga
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