Oncorhynchus tshawytscha (Chinook salmon): 112230369
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Entry
112230369 CDS
T05605
Name
(RefSeq) homeobox protein OTX1 B-like isoform X1
KO
K09326
homeobox protein OTX1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112230369
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
112230369
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
CPSF73-100_C
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
112230369
NCBI-ProteinID:
XP_024252402
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All DBs
Position
LG32:complement(6976121..6981840)
Genome browser
AA seq
363 aa
AA seq
DB search
MMSYLKQAPYGMNGMGLSGTAMDLLHPSVGYPDRNGFEEFPLTGFYSISAHPRKQRRERT
TFTRTQLDILESLFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQAQSGNNA
KVRPAKKKSSPTRESTGSESSGQFTPPAVTSTGSSSSSSASSGGSHPSGHGGQGLSSTST
SVTAPVSSIWSPAPISPAPAPPPVPDPTPPTNASCMQRSVSGTGGTSSYPVSYSQTAAAY
GQGYPAPASTGSYFGGVECSSYLAPMHSHHHPHHPHQLSPMTGSSMSGHPHHHIGQTSGH
HHHHHPHHHQAYSGAGLAFNSSDCLDYKEQTAAAAASSWKLNFNTTDCLDYKDQASSWRF
QVL
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaaacaggccccgtacggcatgaacggaatggggctcagcggtacg
gccatggacctactgcacccatcagtggggtatccagatcgaaatggcttcgaagagttt
ccattgacaggtttctattccatttcagcgcatccgaggaaacagcggagagagaggaca
acttttactcgcactcagctggacattctggagtcccttttcggcaagacgcgctaccca
gacattttcatgcgggaagaagtcgcactgaaaatcaatttgcctgagtctagagtccag
gtatggttcaagaacaggagagccaagtgccgtcagcaggcccagagtggaaacaatgct
aaagtccggccggccaagaagaagtcctctcctaccagggagagcacaggctcagagagc
agtggccagttcacccctccggcagtgaccagcaccggctcctcttcctcttcctctgcc
tcgtccggtggctctcatccctccggccatggaggccaaggcctgagcagcacttctacc
tccgtcactgccccagtgtcctccatctggagccctgcgcccatctccccggcccccgca
ccaccccctgtccccgaccccactccccccaccaatgcctcctgcatgcagaggtctgtg
tcaggtactggaggcacgtcctcctacccggtgtcctacagccagacagcagcggcctat
gggcagggctaccccgccccggcgtcaacgggctcctacttcggaggggtggaatgcagc
tcgtacctggcccctatgcactctcaccaccacccccaccatccgcaccagctcagcccc
atgacgggctcctctatgtctggccatccacaccaccacatagggcagacctcagggcac
caccaccatcaccacccccaccaccaccaggcctacagcggggccggcctggccttcaac
tcctcagactgtctggattacaaagaacaaacggccgcggccgcagcctcttcatggaaa
ctcaacttcaacaccactgactgcttggactacaaagaccaggcttcctcctggcgtttc
caagtcttgtga
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integrated database retrieval system
