Oncorhynchus tshawytscha (Chinook salmon): 112230372
Help
Entry
112230372 CDS
T05605
Symbol
psmc4
Name
(RefSeq) 26S proteasome regulatory subunit 6B isoform X1
KO
K03063
26S proteasome regulatory subunit T3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
112230372 (psmc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
otw03051
]
112230372 (psmc4)
Proteasome [BR:
otw03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
112230372 (psmc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_2
AAA_16
AAA_22
RuvB_N
DUF815
nSTAND3
NPHP3_N
AAA_28
RNA_helicase
AAA_14
Mg_chelatase
TIP49
NTPase_1
NACHT
TsaE
ATPase_2
AAA_3
AAA_lid_PRS2_C
AAA_7
NB-ARC
AAA_33
CCDC136_middle
Parvo_NS1
AAA_17
AAA_18
IstB_IS21
AAA_25
AAA_24
DUF3450
ABC_tran
DivIVA
Motif
Other DBs
NCBI-GeneID:
112230372
NCBI-ProteinID:
XP_024252413
LinkDB
All DBs
Position
LG23:complement(9472696..9486280)
Genome browser
AA seq
418 aa
AA seq
DB search
MEDIGVTVEKIQDEVPVMLNSRPQTGLSFLAPEPEDLEDLYSRYKKLQQELEFLEVQEEY
IKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTID
RELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREA
VELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYL
GEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD
QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEEVDL
EDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaggacattggagtaactgttgaaaaaattcaggacgaagtgcctgtcatgctgaac
tcacgaccccagacggggctttctttcttggccccagaaccagaagatcttgaagacctt
tacagcagatacaagaagctgcagcaggagctagagtttctggaggtgcaggaggagtac
atcaaagatgaacagaagaacctgaagaaggagttcctccacgcccaggaggaggtaaag
aggatacagagtatccccctggtcatcggccagttcctggaggctgtggaccaaaacaca
gccatcgtgggctccaccacaggctcaaactactatgtgcgtatcctaagcaccatcgac
agagagctgctgaagcccaatgcgtcggtggccctgcacaagcacagcaatgccctggtg
gatgtgctccccccagaggctgacagcagtatcatgatgctcacatcagaccaaaagccg
gatgtgatgtatgctgacatcggagggatggatatccagaagcaggaagtgagggaagca
gtggagcttccactcacacactttgagctttacaaacagattggcattgacccgcccagg
ggggttctgatgtatgggcctcctggctgtgggaagaccatgctagccaaggctgtggct
caccacacaacagcggcgttcatccgcgtggtaggctccgagtttgtgcagaagtacctg
ggcgagggcccccgcatggtgcgtgacgtcttccggctggccaaggaaaacgcacccgcc
atcatcttcatcgatgagatcgatgccatcgctaccaagcgttttgatgcacagactgga
gcggacagggaggtgcagaggattctgctggagcttctcaaccaaatggacggctttgac
cagaccgtcaacgtcaaggtgatcatggccactaacagggccgacaccctggaccccgcc
ctcctgcgcccaggccgtctggacagaaagattgagtttcccctacctgaccgccggcag
aaacgcctggtcttctccaccatcaccagcaagatgaacctctcggaggaggtggacctg
gaggactatgtggccagaccagacaagatctccggagcagacatcaactctatctgccag
gaggctggcatgctggctgtccgtgaaaataggtacatcgtcctggccaaggactttgag
aaggcctacaagactgttatcaagaaggatgagcaggagcacgagttctacaagtag
DBGET
integrated database retrieval system
