Oncorhynchus tshawytscha (Chinook salmon): 112230375
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Entry
112230375 CDS
T05605
Name
(RefSeq) aftiphilin isoform X1
KO
K25218
aftiphilin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112230375
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
112230375
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin_bdg
Motif
Other DBs
NCBI-GeneID:
112230375
NCBI-ProteinID:
XP_024252414
UniProt:
A0A8C8FPM2
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Position
LG32:complement(6750658..6765140)
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AA seq
924 aa
AA seq
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MEPDVIRMYSSSPPPMEDGAEEEDEEFGDFGGFSGVPTSTSFNEFDTPATFNQTPALAAT
SPPELLNNGGVVRLSNLSSGPVGRGPVVKRANSKSNGVVPGGCQYDSPLERTVNVEELKK
LADHTRANNHSTSLDKSGRGQTDNIDKPVDCNGGVPEVLTNGFVTFEIEGIPSLQNSNRS
KKKGTTTECADNCPPSSPEDDFADFSAFPNVDVQGHSSEVTNLTSENLDNSNRDERLAED
TCQQQKHSNVEQGIRSGDVVGDTPITTGSNDIAGSDSLSHLAEVRDTDEGLSNGDFQRDT
ANSEQRNIEPDFAHKHSATEVIVSEDSAPEEVCSEDSTQELVCGEDSASKALYIDEPVAQ
NGVYLEQSEEEAEEEKAGVSENRGSPDTDDEDGNGEQADEKSGSGNETETETETSFGRPL
STDALEEYGDISTTGSVPSPLLQEETATPADHSQLLEDDDDGEDFGDFGDFGDFGDVGSF
SGQGFADFDQPELQLEEQPAPPTQELVDHDKDFGEFDAPNSHIGGGKAIENEDRGKFADF
PSSNSFADFSSAPVGADPDPDAGWNAFDEPVQGQGEGNSWAAFGEEPTANAPLETGEDEW
QESEPVAARSSSSHQISRRDSQSVALCSRLEKLFLEIFPDALAPQVRVEVVSLKTLLEPP
VRLQQEEHEMMSGVPDNGAEGDVLWRQLLDIHEAFGLRHQWGGSHSNKTLLCSLGIDIRN
ILFTGQKKQPVIVPMYAASLGMLEPTKEPVKPISAAEMITSIAQQVPPVAPAEIISTSPP
DTAQEVLPPVQFDWSSSGLTNPLDASGGSSLLNLDFFGPVEDSGPSSSTSIPGVDPELYE
LTTAKLDPSGSGTRVADAFARLMSTMEKTSTSTRKPRKEENLSEETLKVIAGLPDLSFMQ
AKVLMFPTTLTPLGCSSDPDPTLD
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggagccggacgtgatccgcatgtactcctcctccccacccccaatggaggacggagct
gaggaagaggacgaggagtttggggactttgggggcttctctggagttccgaccagcacc
agcttcaatgagtttgacaccccagcgaccttcaatcagaccccagccttggctgccact
tcaccacctgaactcctcaacaatggaggggtggttaggttgtcaaacctcagttcaggt
cccgtgggaaggggtcccgtggtcaagcgcgccaactccaagtcaaatggtgttgtgccg
ggaggctgtcagtacgacagtcctttggagagaactgtgaatgtggaggagttaaaaaag
cttgccgaccacactcgagccaataatcattctacctccttggacaaatctgggaggggt
cagactgacaacatagacaagcctgtcgactgcaatggtggggtcccggaagttctgacc
aacggctttgtgacttttgaaatagagggaatcccatctttgcagaattcaaaccgctct
aaaaagaaaggaaccaccacagagtgtgccgacaactgccctcccagcagccccgaggac
gactttgcggatttctctgcttttcctaatgtagatgttcaaggacactccagcgaggtg
acaaacctcaccagcgagaacttggacaatagcaaccgggacgaacggctggcagaggac
acctgccagcagcagaagcactctaatgtagagcagggaatcaggtcaggggacgtcgtc
ggggacactcccattacaactggatccaacgacatcgctggctctgattctctatcgcac
cttgctgaggttcgagacactgatgaaggcttgagcaacggggactttcaaagagacact
gctaactctgagcaaaggaacatagagccggactttgcacacaagcactctgctactgag
gtgattgttagtgaggattctgccccagaggaggtttgtagtgaggattctacccaagag
ttggtttgtggcgaggattctgcctccaaggcactttatattgacgaaccggttgcccag
aacggtgtgtatttggagcagtcggaagaggaggcagaagaagagaaggcaggtgtcagt
gaaaacaggggttcgcccgatacagacgatgaagatgggaatggcgagcaagcagacgaa
aagtctgggtccggaaacgaaacagaaacagagaccgaaacgtctttcggccgaccgctg
tccacggatgcccttgaggagtacggcgacatcagcacgacgggctctgtgccctcgcca
ctgctccaagaggagacggccacgcctgccgaccacagccagctgctggaggacgacgac
gacggtgaagactttggtgactttggagactttggagacttcggggacgtgggctctttt
agcggacagggctttgctgactttgaccagccagagttgcaactagaggaacaacctgca
cctcccacacaggaactagtggaccacgacaaggactttggtgaatttgacgcccccaat
agccacattggtggtgggaaggcaattgagaatgaagatagggggaagtttgcggatttt
cccagcagcaacagttttgccgactttagctcggctcctgttggtgcggaccctgatcca
gatgctggttggaatgcctttgatgagcctgtacagggtcaaggggagggaaattcctgg
gctgcatttggagaggagccgaccgccaatgctcctttggaaacgggtgaagacgagtgg
caggagagtgaacctgtagcagcccgttcatccagcagccatcagatcagtagaagagac
agtcaatctgtggcgctgtgcagtcggctggagaagctttttctggaaattttccccgac
gcacttgctccgcaggtgagggtggaggtggtctccctcaaaaccctgctggagcctcct
gtgaggttacagcaggaagagcatgaaatgatgagcggtgtgccagacaatggggccgag
ggggacgtgttgtggaggcaactgctggacatccacgaggcatttggcctgcggcaccag
tggggcggctcgcacagcaacaagacactactctgctccctgggcatcgacattaggaac
attcttttcacaggtcagaagaagcagccagtgatagttcccatgtatgctgccagcctg
ggcatgctggaacccaccaaagagccagtaaaacccatatcagcggcagagatgatcacg
tccatagcacaacaagtacctccagtggccccagcagagatcataagcactagtccacca
gacacagcccaggaagtgctcccgcccgtccagtttgactggagcagcagtggccttact
aaccccctggatgcgagcggaggctcgtctctgctcaacctcgatttctttgggcccgtg
gaggactctggccctagcagctccacctccatcccaggtgtggacccggagctgtatgag
ctaaccactgcgaaactggaccccagtggctctgggacccgtgtggctgatgcctttgcc
cgccttatgtctactatggagaagaccagcacctctaccagaaagccccggaaagaggag
aacctaagtgaggagacgttgaaggtgattgcagggctaccagacctgtctttcatgcag
gccaaggtgctgatgttccccaccacgctgacccccctgggctgctcctctgaccctgac
cccacactcgactga
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