Oncorhynchus tshawytscha (Chinook salmon): 112230377
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Entry
112230377 CDS
T05605
Name
(RefSeq) ras-related protein ORAB-1
KO
K07874
Ras-related protein Rab-1A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112230377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112230377
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112230377
04031 GTP-binding proteins [BR:
otw04031
]
112230377
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
112230377
Autophagy
Other autophagy associated proteins
112230377
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112230377
Exosomal proteins of other body fluids (saliva and urine)
112230377
Exosomal proteins of colorectal cancer cells
112230377
GTP-binding proteins [BR:
otw04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
112230377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
Gtr1_RagA
SRPRB
AAA
FeoB_N
ABC_tran
AAA_7
PduV-EutP
AAA_16
LANC_like
AAA_29
AAA_22
Septin
AAA_5
Dioxygenase_N
TniB
Motif
Other DBs
NCBI-GeneID:
112230377
NCBI-ProteinID:
XP_024252417
LinkDB
All DBs
Position
LG32:6727681..6730915
Genome browser
AA seq
202 aa
AA seq
DB search
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKLVDYTTAKEFADNLGIPFLEASAKSATNVEQAFMTMAAEIKKRMGPGATAG
GSDKSNVKIQSTPVKTSSGGCC
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgaatacgattatttattcaagctgcttctgattggcgactctggcgttgga
aaatcttgcctcctcctccgatttgcagacgacacatacacagagagctatattagcact
attggagtggacttcaaaattaggaccatagaattagatggaaagaccataaaacttcag
atttgggacacagctggacaggaacggttccggacaattacatccagttactacagagga
gcgcatggcattattgtagtgtacgacgtcacagaccaggaatccttcaataacgtgaaa
cagtggctacaggagattgaccgttatgccagtgaaaatgtgaacaagctgttagtaggc
aacaaatgtgacctgacgacaaagaaactggtggactacacaacggccaaggaatttgct
gacaatttagggatccccttcttggaagccagcgccaagagtgccaccaacgtggagcag
gccttcatgaccatggcagctgagatcaagaagagaatgggccctggggccacagccgga
ggttcggacaagtccaacgtcaagatccagagcacgccagtcaagacctcctctggaggc
tgctgctga
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integrated database retrieval system
