KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112230402
Entry
112230402         CDS       T05605                                 
Name
(RefSeq) striatin isoform X1
  KO
K17608  striatin 1/3/4
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:otw01009]
    112230402
Protein phosphatases and associated proteins [BR:otw01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Other PP2-interacting proteins
     112230402
SSDB
Motif
Pfam: Striatin WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_IFT140_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_IP5PC_F Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_Aladin Beta-prop_DCAF4 Beta-prop_VPS8 WD40_RFWD3 Beta-prop_NUP159_NUP214 Beta-prop_ACSF4 Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 112230402
NCBI-ProteinID: XP_024252458
LinkDB
Position
LG32:complement(5898068..5988724)
AA seq 784 aa
MDEQAGPGVFFNNNNNSGLPGAGKGPQLPGDVGGGEAARAHYNIPGILHFLQHEWARFEV
DRAQWEVERAELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERSKYHKLKYGTEL
NQGDMKPPSYDDSDEGNENEVPSPPNSSQLGWKQGRQLLRQYLQEVGYTDTILDVKSQRV
RALLGLAGDSGERPSVRKPEPMVNGTEPSFQKGSGMISKPDMSDSATVLEAFKFIESAAA
EFSDEDDDEDSDGRDKTIMNLATMVRKKTSSSPSSSSDMSDDPDTEEALKGFDFLASPDE
MEGSPDVRSVEDSGDWEKEEQCPMPEAWDVDQGLIAQLKEQYRKERKGKKGVKRPNRSKL
QDMLANLRDAEDLPSMQPPVTPPSRPSVPRLNEHEVGHPEEVEAMTFPPTSGKSFIMGPD
EAAESELGLGELAGLTVANEADSLAYDVTSSQDALRKTWNPKFTLRSHFDSIRGLAFHPV
EPVLVTASEDHTLKLWNLQKTAPAKKCAALDVEPIYTFRAHRGAVLCVTMSSTGEQCFSG
GVDGTIQSWNTPNPNIDPYDSYEPSVLRGALLGHTDSVWGVVYSSAHQRLLSCSGDGTVR
LWNAANTSPALAIFNEKGELGVPTSVDLVCSESAHMVTSFSTGEIGLFNMETRQLILKLD
QTGEPEAPCKINKVLSHPTLPITITAQEDRHIQFFDNNTGKCIHSMVAHLDAVTSLAVDP
NGLYLMSGSHDCSIRLWNMESKTCIQEFTAHRKKSDEAIHDVAFHPTKCYIGSAGADALA
KVFV
NT seq 2355 nt   +upstreamnt  +downstreamnt
atggacgaacaggcagggcccggcgtgttctttaacaacaacaacaactcgggtttgcca
ggcgctggcaaaggaccgcagctgccgggcgacgtcggtggcggagaggcggccagggct
cattacaacattccggggatattgcactttctgcaacacgaatgggcccgcttcgaggtg
gatagagcgcaatgggaggtggagcgagccgaattgcaggcccagatagccttcctgcag
ggtgagaggaagggccaggagaacctgaagaaggacctggtcagaaggatcaagatgctg
gagtatgccctcaaacaggagaggtcaaaataccacaagctcaaatatggaacagagttg
aaccaaggagacatgaaacctcccagctacgatgattccgatgaagggaatgaaaacgag
gtcccgagcccccccaacagtagtcagctgggttggaaacagggacggcagctgctcaga
cagtaccttcaggaggtgggctacacggacaccatcttggatgtaaagtcccagagggtc
agggcgctgctgggcctggctggagactctggagagaggccgtcggtcaggaaaccggaa
cccatggtcaacggcaccgagccatcttttcagaagggcagcggcatgatcagtaaacct
gacatgtctgactcggccactgtccttgaggccttcaagttcatagaaagcgctgccgcc
gagtttagcgacgaagatgacgacgaagacagcgacgggagggacaagaccattatgaac
ttggccactatggtgaggaagaagacgtcttcttccccctcctcatcctcggacatgagt
gacgacccggacacagaggaggccctgaagggctttgacttcctggccagcccagatgag
atggaaggatcgcccgatgtccggagtgtcgaagacagcggtgactgggagaaggaagag
cagtgccccatgcctgaggcctgggatgtggaccagggtctcatagcccaactcaaggag
cagtacaggaaggagcgcaagggcaaaaagggggtgaagaggcctaatcggtccaaactg
caggatatgctggccaacctgcgagacgccgaggatctcccctccatgcagccccccgtg
acaccgccatcccggcccagcgtccccaggctcaacgagcacgaagtgggccaccccgaa
gaagtggaggccatgacgtttccgcccacgtcagggaagtcgttcatcatggggccggac
gaggcggcggagagcgagctaggcctgggcgagctggccggcctcactgtggccaacgag
gcggacagcctggcctacgacgtgaccagcagtcaggatgcgctgcggaagacgtggaac
cccaagttcacgctgcggagccactttgactccatccgcggcctggccttccaccccgtg
gagcccgtcctggtcactgcctccgaggaccacaccctcaaactgtggaacctccagaag
accgcccccgccaagaagtgtgctgccctagatgtggaacccatctatactttcagggcc
catcggggtgcggtgttgtgtgtgaccatgagctccacaggggagcagtgcttcagtggg
ggggtggatggaaccattcagagctggaacacccctaaccccaatattgacccctatgac
tcatatgagccctcggtgctgcggggtgcgctgctgggtcacactgactcagtgtgggga
gtggtctacagctcggcccaccagcgcctgctctcctgctccggggatggcacggtgcgc
ctgtggaacgctgccaacacctcccccgcactcgccatcttcaacgagaaaggagaactg
ggcgtccccacgtcagtggacctggtgtgcagtgagtcggcccacatggtgacgtcattc
agcacgggggagatcggactcttcaacatggagacgcggcagctgatcctcaagctggac
cagactggagagcccgaagccccgtgcaagatcaacaaggtgctgagtcaccccactctg
cccatcaccatcacggcccaggaggaccgacacattcagttctttgacaacaacacaggg
aaatgtattcactccatggtagcccacctggacgcagtcaccagtttagctgtggatccc
aatggcttgtacctgatgtctggcagccacgactgctccatccgcctgtggaacatggag
agcaagacgtgcatccaggagttcacagcgcaccgcaagaagtcggacgaggccatccac
gacgtggcgttccaccccaccaagtgctacatcggcagcgccggggccgacgcgcttgcc
aaggtcttcgtatga

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