Oncorhynchus tshawytscha (Chinook salmon): 112230407
Help
Entry
112230407 CDS
T05605
Name
(RefSeq) CSC1-like protein 2 isoform X1
KO
K21989
calcium permeable stress-gated cation channel
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112230407
Transporters [BR:
otw02000
]
Other transporters
Pores ion channels [TC:
1
]
112230407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
112230407
NCBI-ProteinID:
XP_024252464
LinkDB
All DBs
Position
LG32:complement(5551217..5649313)
Genome browser
AA seq
836 aa
AA seq
DB search
MGIWPGGVRACIAGQENCSPNNESKDYCYSARIRSTVLQGLPFGGVPTVLALDFMCFLVL
LFVFSILRKVAWDYGRLALVTDADRSKKCFSGLEEREYVASALHSEAPDRYERLTSVSSS
VDFDQRDNGFCSWLTAIFRIKDEEIREKCGEDAVHYLSFQRHIIGQLVVVGVLSVGIVLP
VNFSGDLLENNAYSFGRTTIANLKSGTNLLWLHTSFAFIYLLLTVYSMRRHTSKMHYKED
DLVKRTLFINGISKYAEEVHIKQHFEQAYENCTVLDARICYNVAKLMSLNAERKKTERSL
KFFTDLMAKEHMPTMINPKPCGHLCCCVIKGCEQEEAVSFYTKREAKLKEDYRKEKEKVN
TKPLGMVFVTFQNEAMTAIILKDFNACQCHGCTCRQEPKSSQFSESLHVYNWSVSYAPDP
QNVRWEHLSLGGISWWIRCFIINCILFLLLFFLTTPAIIISTMDKFNVTKPVEYLNNPII
TQFFPTLLLWAFSALLPTIVYYSAFFEKHWTRSGENRTTMHKCYTFLIFMVLLLPSLGLS
SLDVFFRWLFDKKFLADATVRFECVFLPDNGAFFVNYVIASAFIGNAMDLLRIPGLLMYM
IRLSLARSSAERRNVKRHQAFEFQFGAAYAWMMSVFTVVMTYSITCPIIVPFGLMYMLLK
HLVDRYNMYYAYLPSKLDKKIHSGAVNQVVAAPILCLFWLLFFSTMRTGFVTPTSMFTLV
VLIITIVVCLSHVCFGHFKYLSAHNYKIDTKETDVDVVENGRPPLRTFSAPSTKSQQPTY
IAQVLRDPITDDACTGSGVEDRGSSQDEEMINTGNSLNEADFQSGEDSLIANEVHQ
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggggatatggccagggggtgtccgggcctgcattgcaggccaggagaactgctctccc
aacaatgaatccaaggactactgttactcagcccgaatccgcagcaccgtgcttcagggc
ctaccctttggaggcgtccccacagtccttgcgctggactttatgtgcttcctggtgctt
ctatttgtcttctcaatattgcggaaagtggcctgggattatggacgcttggcattggtg
acagacgctgacagatcgaagaagtgtttcagcggattggaggagcgggaatacgttgcc
tcagctctgcattctgaagcgccagaccgctatgaacgtctcacttcagtctccagctct
gtcgacttcgatcaacgggataacggcttctgttcctggttaactgccatcttcagaata
aaggacgaggagatccgggagaagtgtggtgaggatgctgtgcactatctttccttccag
cgccacatcatcggccagcttgtggttgttggggttctgtctgtgggcatcgtcctgccg
gtcaacttttctggagaccttttggaaaataatgcatacagctttgggcggaccactata
gcaaacctgaagtctgggactaacctcttgtggctccacacttcatttgcattcatatac
ctgcttctgactgtgtacagcatgagacgacacacttccaagatgcattacaaggaggac
gacctggtgaaacgcactttatttatcaacgggatctccaaatatgccgaagaggtccac
ataaaacaacactttgaacaagcctatgagaactgcactgttctggatgctcgaatctgc
tacaacgtagccaaactcatgtccctgaatgctgagaggaagaagacagagcgcagttta
aagttcttcactgatctcatggccaaagagcacatgcccaccatgatcaaccccaaaccc
tgtggacacctctgctgctgtgtcatcaaaggctgtgagcaggaagaggcggtgagcttc
tatactaagcgggaggccaaactgaaggaggactacagaaaggagaaagagaaggtcaac
accaaaccccttggcatggtgttcgtcactttccagaatgaggccatgaccgcaataatc
ctaaaggacttcaatgcctgccaatgccatggctgcacttgtcgccaagagcccaagtca
tcccagttcagtgaaagtctccacgtctacaactggagtgtgagctatgctcctgaccct
cagaacgtgcgctgggagcacttatcattgggggggatttcctggtggattcgctgcttc
atcatcaactgcatccttttcctcctgctcttctttctcaccacgcccgccatcattatc
tccacaatggacaagtttaacgtcaccaagcctgtggagtatctcaataaccccatcatc
acccagtttttccccactttgctcctgtgggccttctctgccctgctgccgaccatcgtc
tactactctgctttcttcgagaaacactggacgagatcaggggagaaccggaccaccatg
cacaagtgctacaccttcctcatcttcatggtcctcttgcttccttcactgggtcttagc
agtttggatgtcttcttccgctggctgtttgataagaaattccttgctgacgccacagtc
agatttgagtgtgtcttcctccctgacaacggagccttcttcgtcaactatgtcatcgcc
tcagcgtttatcggtaacgccatggacctgctgcggattccaggcctgctcatgtatatg
atccgactgtccctggcccgttcctctgcagagaggcgcaacgtaaagagacatcaagca
tttgaattccagtttggagcggcctacgcctggatgatgtccgtcttcactgtagttatg
acatacagcatcacctgtccaatcatcgtcccctttggtctgatgtacatgctgctgaag
cacctggtggatagatacaacatgtattacgcttaccttccctcgaaactggacaagaaa
atccactccggtgctgtcaatcaggtggtagcagctcccatcctctgtctcttttggctg
ctattcttttccaccatgcgcacaggctttgtgacccccacgtccatgttcactttggtg
gtcctaatcatcaccattgtggtatgcctgtcgcacgtctgcttcggccacttcaagtac
ctcagcgctcacaactacaagattgacaccaaggaaacagatgttgacgtggttgaaaat
ggccgcccaccactccgcaccttctccgctccttctactaagtctcagcaaccaacgtac
attgcccaggtcttacgggacccaatcacggatgacgcttgcacaggtagtggggtggaa
gatcgggggtcctcacaggatgaggagatgatcaacactggaaatagtctcaatgaagcc
gatttccagtctggtgaagacagcctcattgccaacgaggtccaccagtaa
DBGET
integrated database retrieval system
