Oncorhynchus tshawytscha (Chinook salmon): 112230438
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Entry
112230438 CDS
T05605
Name
(RefSeq) signal-induced proliferation-associated 1-like protein 2 isoform X1
KO
K17702
signal-induced proliferation-associated 1 like protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rap_GAP
SPAR_C
Rap-GAP_dimer
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
112230438
NCBI-ProteinID:
XP_024252511
LinkDB
All DBs
Position
LG32:complement(3863321..3972107)
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AA seq
1727 aa
AA seq
DB search
MQSDNLFNKKLQALKGPMGPPNANVQGTPAMPKMGVRARGSDWPQRKDGWESQPPPRYDS
LVPTFQKGPSNLSTEVILQKNQELLSAEFPETKYPLCDLLSHSPMKGFPGIKRSNSEVTI
SDIGAEDLDHTTINPNTGATLRREYGSTSSLDKQSLSGASEGFVGTLRGYHMEDRSDQPR
VPPPQSFPELLRLNTTLSPSLQTAAQIARGDIVCIPGYDYVDSSLLYSREREKSFIQRMK
AEKADTSIFRRLRNVKCEGEYLDQEYGGRFGRPLSFQKCFAHYDVQSVLFNISEAVANRA
DLGRRKNTTTGASAASQCQVPASGLGDSAMPMPICESPVGSCEDLGHKASMDADEGDGKS
NTLVLSCPYFRNETGGEGERKVALSKASSASYGSGDYAANYGGGGQGYSVESSLSTRCTN
AGVSVLEVPRESQAFHRDMYKRYIIEHIDQGAYYYHKYFYNKDHQNYFGTDENLGPVAVS
IRREKLDEGKEGAQYNYRVTFRTSELTTLRGAILEDAVPSTAKHGTARGLPLKEVLEYVV
PELNIQCLRLATSSPKVPEQLLKLDQQGLSFQHKVGIMYCQAGQSTEEEMYNNESASPSL
EEFLELLGQRVRLKGFTKYRAQLDNKTDSTGTHSLYTTYKDYELMFHVSTLLPYTPNNRQ
QLLRKRHIGNDIVTVIFQEPGALPFTPKNIRSHFQHVFIIVRVHNPCTENVCYSVAVTRS
KDVPAFGPPIPQGVLFPKSAMFRDFLLAKMMNGENAVHKSDKFRAMAMRTRQEYLKDLSE
NFVSANPVDSSAAKFSFISLGVKKKERSRPRRNAHLQSYGAVTWAVVARDFGQSADIGCL
LAVSNEFVVLIEEASKEVVFNCYCRDVLGWSATSGSVRLFYERGECVVFSTQEGCLDDVR
EIMQRLEIVTRGCETVEMTLRRNGLGQLGFHVNFEGVVADVEPFGFAWQVGLRPGSRLME
ICKVAVATLSHEQMIDLLRTSNTVSVVIVQPHEDGTPRRSCSEMYRIPVVEYKTTTAAGW
HRVSAAPGGGPSMSRTSPTQGPSPGQQMFHYAQGAISRSTSFDRKQQDGTRVLQEYEISP
TASCSSREPGQLYCSSPSNQSTSSDPGPCGTWSQKAGCINVCQSPALLLDQPSDKEGEGR
REREPKLERTRSAEAKWHHPSTKILNMRERSQPRPGAKDSPNKYQHSGSSHSSSNTLSSN
ASSGSSDDKHFGSGDPMDPDALGLIYIKGASTDSGIDTAPCMPPPPPPLPGCGGGGVPGV
SAGRPVPQNARGEQWVLEYHGAGGYHGAGTPEGGLTSQGYSTQATSAGHVTDGSLGDLSE
ISSMSSGSQHSGSPSERGPKTSNSVDSSKVYIVSSGSTVTGAGLNDPIHARQSPGKEYLI
GWKKAMDGSPMEDLGRPKDYGGMEGVLSFLLKTLTLRSRLRAMLGADSQVQPSLTREAFL
KMMLPDSPPGEGGRGKSLTGPGGLPMSPRRSLYRTLSDESLCSSYRKNLSLVSSRSSLLD
QALPNDILFSTPTEPHHSTLPPRVNLGHCHGAPLHKNELWFSDSSLADRCKMADGSLMPL
PEAVSGLDWSHLVDAARAFEELSYGLYLEGLELDKDTSRLCDKDCPKDLLAVDQGSLCSM
LDVEQAQQAMELSRELNRRVAASEAAALEAGNDSPALLTGKVIQLEEILRQLQFDLQKEQ
EDKAMLQEQVQHLRQDNMRLHEESQTAAGQLRRFSEWFLNSVDNKKP
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcggataacctgttcaacaagaaactacaagcgttaaaggggcccatgggacct
ccaaatgccaacgtgcaaggaacgccagccatgcccaagatgggtgtccgggcgaggggg
tcggactggccccagcgaaaggacggctgggagtcacaacctccaccacgctatgacagc
ctggtgccgaccttccagaagggaccgtcaaatcttagcacagaggtcatcctccaaaag
aaccaggagttactcagtgccgagttcccagagaccaagtatccgctgtgtgacctcctg
agccactcccccatgaagggcttccctgggatcaagaggagcaacagcgaggtcaccatt
agtgacatcggcgccgaagacttggatcacaccaccatcaaccccaacactggggccacc
ttgcgccgtgagtatggcagcacgtcctctctcgacaagcagagtctgtccggcgccagc
gaaggctttgtgggaaccctgaggggctaccacatggaggaccgctcggaccaaccccgc
gtgcctcctccacagagtttcccggagctgctgcgtctcaacaccaccctgtcacccagc
ctacagacggccgcccagatcgcgcgaggcgacattgtctgcatcccgggctacgactac
gtggacagctccctgctctacagccgtgagcgggagaagtccttcatccaacgcatgaag
gcggagaaggctgacacctccatcttccggaggctgcggaatgtgaagtgcgagggcgag
tacctggaccaggagtacggagggcgcttcggaaggcccctgagcttccagaagtgcttt
gcccactacgatgtgcagagcgtcctcttcaacatcagcgaggcggtggccaaccgcgct
gacctgggtcgcaggaagaacactaccactggggcatcggctgcctctcagtgccaggtg
ccggcttctgggctgggagacagcgccatgcccatgcccatctgtgagtcacccgtaggc
agctgcgaggacctgggccacaaggccagcatggacgcagatgaaggggatgggaagagc
aataccctggtgctcagctgtccgtacttccgtaacgagactggtggcgagggcgagagg
aaggtggccctgagcaaagccagcagcgccagctatgggagtggagactatgctgctaac
tatgggggtggaggacaaggctactctgtggaatcatcgctcagcacccggtgcaccaac
gcaggggtgtcggtgctcgaggtgccaagggagagccaggctttccacagggacatgtac
aagcgctacataatcgaacacattgaccaaggtgcttactactaccacaagtacttttac
aataaagatcaccagaactactttggcacggatgagaacttgggccccgtggcggtcagt
atccgccgggaaaagctggatgagggaaaggagggagcacagtacaactaccgggtaacc
ttccggactagcgagctcaccactctccgaggggccatcctggaagacgccgtgccctcc
accgctaagcatggtacggccaggggcctaccgctgaaggaggtgctggagtatgtggtc
ccagagctgaacatccagtgtctcaggctggccaccagctcgcccaaggtccctgagcag
ctcctcaagctggaccaacaggggttgagcttccagcacaaggtgggcatcatgtactgc
caggcgggccagagcaccgaagaggagatgtacaacaatgagagtgccagcccttccttg
gaggagttcttggagctgctgggccagagggtcaggctgaagggcttcaccaagtaccgg
gcccagctggacaacaaaacggattccactggaacacattctctctacactacttacaaa
gactatgaactgatgtttcacgtgtccacactgctcccctacacccccaacaatagacaa
cagctactgaggaagaggcacattggaaatgacatcgtcaccgtcatcttccaggaacct
ggtgctcttcccttcactcccaaaaacattcgctcacacttccagcacgtgttcatcatc
gtcagagttcacaacccttgcacagaaaatgtttgctacagtgtggcggtcaccagatct
aaagacgtgcccgccttcggtcctcccatcccccagggggtgctcttcccaaagtcggcc
atgttccgggacttccttctggccaagatgatgaacggtgagaatgcggtgcataagtcg
gacaagttccgcgccatggccatgcgcacgcgccaagagtacctgaaagatttgtccgag
aactttgtaagcgccaaccccgtggactcttcagcggccaagtttagcttcatctcgttg
ggtgtcaagaagaaggagcgcagccgacctcggcggaacgcccaccttcagagctacggg
gcagtcacttgggccgtggtggcccgggactttggccaatcggcggacattggctgcctg
ctggccgtctccaatgagtttgtggtgctgatcgaagaggcgtccaaggaggtggtgttc
aactgctactgccgcgacgtccttggttggagcgcaacatctgggagcgtccggctcttc
tacgagcgaggcgagtgtgtggtgttctccacgcaggaaggatgcctggacgacgtccgg
gagatcatgcagaggttggagattgtcacccggggctgcgagacagtggagatgaccctt
cggcggaacggtctgggccagctgggattccacgtcaactttgagggcgtggtggcggac
gtggagcctttcggcttcgcctggcaggtgggtctccgtccgggcagccggctgatggag
atctgcaaggtggctgtggccacactatcccacgagcagatgatcgacttgctgcgcacg
tccaacacagtcagtgtggtcatcgttcagccccacgaagacggcacgcccaggaggagc
tgctcggagatgtaccgcatccccgtggtggagtacaagactaccacggctgctggctgg
caccgcgtctcggcagccccgggtggtggcccatccatgtcccggacctcccccacacag
ggcccaagccccgggcagcagatgttccattacgcccagggggccatctcccgcagcacc
tccttcgacaggaagcaacaggacgggaccagggtactgcaggaatatgagatctcccct
acggcctcatgtagcagtcgggaaccaggacaactgtactgcagctcccccagcaaccaa
tccacgtccagtgaccccggaccctgtggcacctggtcccagaaggcgggatgcattaac
gtatgccagtcccctgcactgctcctggaccagccaagcgacaaggagggagagggccgg
agagagagggagcccaagctggagaggaccagatctgcagaggccaagtggcaccatccc
tccacaaagattctgaacatgagggagagaagccagccgagaccaggagcaaaggactcc
cccaataaataccaacattctggctccagccactccagcagcaacacgctctccagcaat
gcctccagcggcagcagcgacgacaagcactttggctctggtgaccccatggaccccgat
gccctgggcctcatctacatcaagggcgcgtctaccgacagtggtatcgacacagcacct
tgcatgcccccgccacctccccctctacccggctgcggcggaggtggtgtaccgggggtc
tcggctggccggccagtcccccagaatgcccgaggggaacagtgggtgctggagtaccac
ggggcggggggttaccatggagcggggacgccggaaggaggattgacgtcacaaggctac
agcacccaggccacttcggctgggcacgtaacggacgggagcctgggcgacctgagtgag
atttcctccatgtccagtggctcgcagcactcaggcagcccctcggaacgtggtcctaag
acctccaactcggtcgactcctccaaagtctacatcgtctcctccggcagcacggtgaca
ggggcggggcttaatgatcccatccacgcccgccaatcaccaggcaaagagtatctgatt
ggctggaagaaagccatggatggctctccaatggaggatctgggcaggccaaaagactac
ggtggaatggaaggcgtattgtctttcctactaaagactctaacactgagatccaggctg
cgggccatgctgggtgcagacagccaggtccagcccagcctgaccagagaggccttcctg
aagatgatgctgcccgacagtccccctggggagggggggcgtggcaagagtctgactggt
cctggcggcctgcccatgtccccacggaggtccctgtaccggaccctgtcggacgagagc
ctgtgcagcagctacaggaaaaacctgtccctggtcagctctcggagctctctcctggac
caggccctgcccaacgatatcctgttcagcacccccactgagccccaccacagcaccctg
ccacctcgcgtgaacctcggccactgccatggggcaccgctacacaagaatgagctgtgg
ttctctgacagctccctggccgaccgctgcaaaatggctgatggcagtctgatgcctctc
ccggaagcagtgtctggcctggactggtcccatcttgttgatgccgcaagagcttttgaa
gaattgtcctatggtctctatctggaaggtctggagctcgacaaggataccagtcgtctg
tgtgataaagactgtcctaaagacttactagcagtggaccagggttcactctgctccatg
ttggacgtggagcaggcccagcaggccatggagctgtcccgtgagctgaatcggagggtg
gctgcgtcggaggctgccgctctggaggcagggaatgattctcctgctctgctcactggc
aaagtcatccaactggaagagatcctcagacagcttcagttcgacctgcaaaaggagcaa
gaggacaaggccatgttgcaggagcaggtccagcacttgcgtcaggacaacatgcgtctg
cacgaggagagccaaacggcagccggccagctcaggaggttcagcgaatggttcctaaac
tcggtcgacaacaagaagccctga
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