Oncorhynchus tshawytscha (Chinook salmon): 112230442
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Entry
112230442 CDS
T05605
Symbol
si:ch211-126j24.1
Name
(RefSeq) LOW QUALITY PROTEIN: phosphofurin acidic cluster sorting protein 2
KO
K23294
phosphofurin acidic cluster sorting protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112230442 (si:ch211-126j24.1)
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
ER-mitochondria tethering complex
112230442 (si:ch211-126j24.1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pacs-1
Motif
Other DBs
NCBI-GeneID:
112230442
NCBI-ProteinID:
XP_024252525
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All DBs
Position
LG32:4078773..4185179
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AA seq
937 aa
AA seq
DB search
MMAAAVERGGVRAAFLNPGSGGGIGGPPPAPMPSAPGAAVGAGGMGSNSGGSDGPMPVPM
NLFATWEIDRSSPSCVPRLCSLTLKKLIVLKELDRELSSVVIAVKIQGSKRILRSNEYVL
PPDGLMETDLELTFSLQYPHFLKRDANRLQIMLQRRKRYKNRTILGYKTLAVGVINMAEV
MQHPTDGAQVLGLHSNVKEVPVRAAELSVYSLSSQPIDHEDGSGQPGTKAKALDRSPDMD
NYSEDDDDSYSSEQEASDDAVQPVDLYDEDEDVQRKPKKNRRKMIRTTSMTRQPNFKQKF
VALLKRFKVTDEVLDSDPVDQTQEVEEDLDLLYDSLEVYNQSDSGPEMEDNESVLSTPKP
KLKPFFEGMSHSSSQTEIGSLHSQKSQPRDLASIGGELLSPDRAKVQIGTKYTDDSAGLE
SPAGDAEDEETRAGTGSGEANPTPISWDLSTDKLPGPVAKLCKTESQTLMSPSKTENKLQ
RRPRSTSMKDRQNSKAQSDRTSSIDSETSPESRIAVQVPRKSVYDQLNQILISDEQLPES
IILINTTDWQGQYLSEILHEHSQPIVCTISGADVHAAFNTIVTRIQRFCNCNAQTPPTIK
VAVAGDQSYLSTILRCFVEQLANKTPDWLSYIRFLVIPVGTHPLAKHMSSFDSKFNNIFM
DAGWRDLFSRLEAPTSDNIDVAGRVSQYLAGASVSHQCPISEAMLTYKQKSPDEDSCQKF
VPFIGLVKVGIVEHNLSTSMDSDDAVMGSINMLASPPPPPGPPYMKDLTCTPPPXPSVTA
TLAGAGSPVTGGEVMGLQVDYWACHGVDKKKEGEKRDVGIKNTLKSNFRSLQVSRIPNGG
ELTPPPGMAMTVVMKEKNKKVIFLSKKPKEKEVDSKSQVIEGISRLICAAKHQHTMLRVS
IDGVEWNDVKFFQLAAQWPTHVKHFPVGIFGYTKPAM
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcggccgtagagagaggaggagtgcgggccgctttcctgaacccaggtagc
ggcggcgggatcggtggaccacccccggcacctatgccctctgctcccggagccgcggtt
ggagcgggaggcatgggttcgaattcgggtgggtcggatggtcccatgcccgtgcctatg
aatctttttgcgacatgggaaatagaccgctcttctccgagttgtgttccaagattgtgc
agcctgaccctcaagaagctgattgtcctcaaagaattggaccgagagcttagctccgtg
gtgatagctgtcaaaatacagggctccaagcgcatcttgaggtctaacgagtatgtactt
cctccagatggactgatggagactgaccttgagctgaccttctcactccagtatccccac
ttcctcaaaagggacgccaaccgattgcagatcatgctgcagaggaggaagcgatataaa
aaccgcaccatcctggggtataagaccttagctgtgggcgtcatcaatatggcagaggtg
atgcagcatccgacagatggagcccaggtcctgggtctccatagcaacgtgaaggaggtg
ccggtgcgtgcggccgagctcagcgtgtattccctgtccagtcagcccattgaccatgag
gacggcagcgggcagccagggaccaaggccaaagccttagatcgctccccggatatggac
aactactcagaggatgacgacgacagctactcctcggagcaggaagctagcgacgatgct
gttcaaccagtggacctgtacgatgaggatgaggatgtgcaaaggaagccaaagaaaaac
cggaggaaaatgattcgtacaacatccatgacaaggcaacccaatttcaaacagaagttt
gtggccctgttgaagagattcaaagtgacggatgaggttctggactcggacccagtggac
cagacccaggaggtggaggaggatctggacctgctctatgatagtctggaggtttacaac
cagagtgacagcggacctgagatggaggacaacgagagtgtcctcagcacgcccaaaccc
aaactcaagcccttctttgagggaatgtcccattcgagctcccagactgagattgggagt
ctacacagtcagaagagccagcccagggacctggccagcatcggtggagagctgctgtcc
ccggacagggccaaagtccaaatagggaccaagtatacagacgacagcgctggattggag
tctcctgcaggggacgcggaggatgaggagactagggctggcacagggtcaggggaggct
aaccccactcccatcagctgggacctgagcacggacaaactgcccggcccagtggccaaa
ctctgcaagaccgagtcccagacactcatgtcgccgagtaaaacagagaacaagctgcag
aggcgtcctcggagcacatccatgaaggaccgacagaactccaaggcccagagtgacagg
accagcagcatcgacagcgagacatccccggaatccaggatcgctgtccaggtccccagg
aagtcagtgtatgaccagctaaaccagatccttatctccgacgagcagctccccgagagc
atcatcctcatcaacaccacagactggcagggccagtatctatctgagattctccatgag
cacagccagcctatcgtgtgcaccatctctggtgcggatgtccatgcggccttcaacacc
atagtcaccaggatccagagattctgtaactgcaatgcccagacacccccaaccatcaaa
gtggcagtggccggagaccagagttacctcagcaccatcctcaggtgctttgtggagcag
ctggccaacaagacgcctgattggctcagctacatccgcttcctggtcatccctgttggc
actcatcctctggccaaacacatgtcttcgttcgacagtaagttcaacaacatcttcatg
gacgctggctggagggacttgttcagcagactggaggccccaacatcagacaacattgat
gtagcaggccgcgtgtctcagtacctggctggggccagcgtctcgcaccagtgtcccatc
tctgaggccatgctcacctacaaacagaaaagccctgacgaggactcctgtcagaagttt
gtgccattcattgggctggtgaaagtgggcatcgttgagcacaacctttcaacctcaatg
gactctgatgatgctgtgatggggagcatcaatatgctggcctcccctccccccccgccg
ggaccaccctacatgaaggacctgacttgcaccccgccccctnccccctccgtcacagcc
accctcgccggagccggctctccggtgacgggcggggaggtgatggggctccaggtggac
tactgggcatgtcacggcgtcgacaagaagaaggaaggcgagaagcgagacgtgggcatc
aagaataccctgaagagcaacttccgctcgctgcaggtgtcccgcatccccaacgggggc
gagctgacccctcctcccggcatggccatgactgtcgtcatgaaggagaagaacaagaaa
gtgatattcctgagtaaaaagcccaaggagaaggaggtggactccaagagccaggtgatc
gagggcatcagcaggctgatctgcgctgccaaacaccagcacaccatgctgagagtgtcc
attgacggtgtggagtggaatgacgtcaagtttttccagctggccgcccagtggcccact
cacgtcaagcactttcctgttggcatcttcggctacaccaagcctgccatgtga
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