Oncorhynchus tshawytscha (Chinook salmon): 112230452
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Entry
112230452 CDS
T05605
Name
(RefSeq) sialic acid-binding Ig-like lectin 5
KO
K06549
sialic acid binding Ig-like lectin 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
otw04090
]
112230452
04091 Lectins [BR:
otw04091
]
112230452
CD molecules [BR:
otw04090
]
Proteins
112230452
Lectins [BR:
otw04091
]
I-type lectins (Siglecs)
112230452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
I-set
V-set
Ig_2
C1-set
Ig_CD22
C2-set_2
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
112230452
NCBI-ProteinID:
XP_042160470
LinkDB
All DBs
Position
LG23:complement(9335615..9340388)
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AA seq
635 aa
AA seq
DB search
MWVLIWAALLFSLTERTTCPMKAPPAAYNITFSPAEITPQTGLCAVIPCSFTHPDDFLAS
IAMWLKCPDERCSVKVETDSIFHSMNSSIAQEGYRRRVALLETDLTKKNCSMIINDITKT
DDGDYQLRLSGTLNSGNISQFTYQKKLKMAVKALTQKPSVLTPPLTEGEPATLTCTAPGI
CSGTPPNITWTWRGTGDNITELRDNTTTQRREDLTRVTTTHFSTLNFTPSAEHHTTKVTC
QVTFIGNITTEETVTLNVTHVKEPKISGSNTVREGDTLNLSCFVDSYPPPPPAITWSKNG
TRALEQNISGLASLTISNMTREHAGEYVCKAQHLNRTASIVVTVIYPPVILNASGCVIQA
KVMTCVCVSQGVPLPLIGWLNTEEYSLTKSVLRSSVNTTIRMHVGNHTNTTVECVSTNEV
GRVREKLQVSLKESQGKQGEEVYKDILALLLNPPPIAAFVIGAAFSSTICCIILCLTGKC
KRCKERIPKDSDSKSPLTKLEMVACEDQQTNAGQAVRGEQTPLQVVLMEGAENTGPQTSG
AAGNSAKGEEPQDVHYATINYSQLKKTPEEAEKKTTTSESEYAKIKRENKKEGYEDGGEG
SGVMDEEENENGKPAAETYENTELYSNVKAIMGGE
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcctcatctgggcagctctacttttctctctgacagagagaaccacatgccca
atgaaggcccctccagcagcatacaacatcaccttcagtccagcagagataacaccacag
actggactatgtgctgttattccatgttcgttcactcaccctgatgacttccttgctagc
atagcaatgtggcttaaatgccctgatgaacgatgttctgttaaagtcgaaacagactct
attttccactcaatgaattcctctatagctcaggagggttatagaaggcgagtagcacta
ctggagacagacctgacaaagaagaactgcagtatgatcatcaacgacatcactaagact
gatgacggagactatcaattaagactgtccggaacattgaacagtggaaatataagtcaa
tttacataccagaagaaactgaaaatggcagtgaaagctctgacccagaagccctcagtg
ttgactcctcctctgacagagggagaaccagcgaccctgacctgcaccgccccggggatc
tgctctggaactcctcctaacatcacatggacatggagagggacaggagacaacatcact
gagctcagagacaacaccactacacaaaggagagaggatctgacccgcgtcacaacaacc
cacttctcaactttgaactttacaccttcagctgagcaccacaccaccaaggtcacgtgc
caagtgacattcatagggaacatcacaactgaggagacagtgactttgaatgtgactcat
gtgaaggaacccaagatctctggtagtaacacagtgagagagggtgataccctgaatctg
tcttgctttgttgacagctacccaccaccaccaccagcaatcacctggagtaagaatggg
acaagagctttggaacagaatatctctggactggcctctctcaccatctccaacatgaca
agagaacatgctggggagtatgtgtgtaaagctcaacacctcaacaggacagcttccatt
gttgtcactgtgatataccctcctgtgattctcaatgcttctgggtgtgtcatccaggca
aaggtcatgacctgtgtgtgtgtcagccagggggttcccttacctctcataggctggctt
aacactgaggagtactccctcactaaatcagtgttgaggtcctcagtgaacaccaccatc
aggatgcatgtcggaaaccacaccaacactactgtggagtgtgtcagcacaaatgaagtg
ggcagagtgagagagaagctgcaagtcagcctaaaagagagccaaggaaagcaaggagag
gaagtatataaagacatcttggctctgctgttgaacccaccaccgattgctgcatttgtg
attggtgcagccttctcatccaccatctgttgtatcatcctgtgtttgacagggaaatgt
aaaagatgcaaagagaggatcccaaaggactcagactccaaaagccctttaacgaaactg
gagatggtggcatgtgaagaccaacagacgaatgcaggacaggctgtgcggggcgaacag
acccctctgcaggtggtgctgatggagggagctgaaaacacaggaccccagaccagtgga
gctgcaggaaactctgccaaaggggaagaacctcaagatgtgcactatgccactatcaac
tactcccaactgaagaagactcctgaggaggcagagaagaagaccaccacctcggagtca
gagtacgccaaaatcaaacgagagaataagaaagaagggtatgaagatggaggagagggg
agtggagtgatggacgaggaggagaacgagaatggtaagccagcagcagagacatatgag
aatacagagctttactccaacgtcaaggctattatgggtggtgagtga
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