Oncorhynchus tshawytscha (Chinook salmon): 112230454
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Entry
112230454 CDS
T05605
Name
(RefSeq) sodium/calcium exchanger 1 isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
otw04260
Cardiac muscle contraction
otw04261
Adrenergic signaling in cardiomyocytes
otw04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
112230454
04020 Calcium signaling pathway
112230454
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
112230454
04261 Adrenergic signaling in cardiomyocytes
112230454
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112230454
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112230454
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
112230454
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Others
112230454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
112230454
NCBI-ProteinID:
XP_024252545
UniProt:
A0A8C8D6B4
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Position
LG32:4661320..4715546
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AA seq
973 aa
AA seq
DB search
MRRTGTSSFLFCALQLTVLLGVFSSEIKFVTAGNSNPSLGTNSSIGNQTNKKCDSVDTEC
KVGVILPIWLPENPSFGDKLARATVYFVALFYMFLGVSIIADRFMASIEVITSQEREITI
KKPNGEKVTTTVRIWNETVSNLTLMALGSSAPEILLSVVEVCGHNFDAGDLGPNTIVGSA
AFNMFVIIGFCVSVIPDGEHRKVKHLRVFFVTATWSIFAYTWLYLILAVISPGIVQVWEG
LVTLFFFPLCVGMAYVADRRLLVYKYMYKRYRAGKRRGVIIETEGEAQIPSKMDIEMDGK
MLNSESFMDGAMGLDEKDLDEEEARREMVRILKELKQKHPEKETEQLIELANYQVLTQQQ
KSRAFYRCQATRIMTGAGNVLKKHAADQARKAVGAYEIRSEVSENDFSSKVFFDPGTYQC
LENCGTVALNVVRLGGDLTNTVSVEYRTEDGTANAGSDYQFTEGVVVFNPGETEKEIRID
IIDDDIFEEDEHFLVHLSNVKVISEGTGYVQPRANHLDTLAGLGLPCSATVTIFDDDHAG
IFTFEEPVMTISESIGMMEVKVLRTSGARGLVVVPYKTMEGTAKGGGEDFEDTHGALEFQ
NDEIFKSIQINIIDDEEYEKNKNFFLEMGEPQLLEMSERKAVLLQEIGGFVKTDKRLYGR
DVYRKVQGRDNPVPATIISLAEEGDEEALSKKEEEERRIAEMGRPTLGEHVKLEVVIEES
YEFKNTVDKLIKKTNLALLIGTNSWRQQFMEAITVSSGDDDEDECGEEKLPSCFDYVMHF
LTVFWKLLFAFVPPTDYWNGWACFVVSISMIGLLTAFIGDLASHFGCTVGLKDSVTAVVF
VALGTSVPDTFASKVAAIQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHNSKGNDF
RVDPGTLAFSVTLFTIFAFVAVAVLMYRRRPEIGGELGGPRGPKIATTCLFFSLWLMYIV
FSSLEAYCHVKGF
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaactgggacatcatctttcctcttctgcgctcttcaactcacagtgttgttg
ggagttttctcatctgaaattaaatttgttacagctgggaattcaaacccaagcctcgga
acaaactcttccattggcaaccaaactaataagaagtgtgattcagtggatactgaatgc
aaagtgggtgtcattctgcccatatggttaccagagaacccatcctttggtgataaactg
gcaagagccacagtttactttgtggccttgttttacatgttcctgggggtctctatcatt
gcggatcgcttcatggcgtccatcgaggtaattacatcacaagagagggagatcaccatc
aagaaaccaaatggcgaaaaagtgacaaccactgtgcgtatatggaatgagacggtgtcc
aacctgacccttatggccctgggttcctcagccccggaaatcctactgtccgtcgttgag
gtgtgcggtcacaactttgacgcaggtgatctgggcccaaacacaatcgttggtagtgct
gccttcaacatgttcgttatcattggattctgtgtttctgtcattcctgatggagagcac
cggaaagtcaaacatttgagggtattttttgttaccgccacctggagtatattcgcgtac
acctggctttatctcatcttggctgtcatctctccgggcatcgtacaggtgtgggagggc
cttgtcacactgttcttcttcccattgtgtgttgggatggcctacgtcgcggatcgcaga
cttcttgtctataagtacatgtacaaacgctaccgcgcagggaaacgaagaggggtgatc
attgagacggaaggggaggcgcaaataccttcaaagatggacattgaaatggacgggaaa
atgctcaactcagagagcttcatggacggagcgatgggtttagatgagaaggacctggat
gaggaggaggccagaagggaaatggtccggatcctgaaggaactgaagcagaagcatcca
gagaaggaaacggagcagctgatagaactggccaactaccaggtattgacacagcagcaa
aagagtcgagccttctaccgatgccaggctaccaggatcatgacgggagcagggaacgta
ctgaagaagcatgcagcagaccaagctaggaaagctgttggtgcgtacgagatccgctcc
gaagtttctgagaatgacttttcgtcaaaggtcttttttgaccccggtacataccagtgc
ttggagaactgcggtacagtggccttgaatgtagtacgccttggtggggacttgactaac
actgtttcagtggaataccgtaccgaagacggcacagccaatgccggatcggactaccag
ttcactgagggcgttgtggtgttcaaccccggtgagactgagaaggagatccggatagac
atcattgacgatgacatctttgaggaggatgagcattttctagtccaccttagcaacgtg
aaggtcatatcagagggcactggctacgtacaaccaagggctaatcacttggacactttg
gcgggccttggcctaccctgctcagccaccgtgactatctttgacgatgaccatgccggg
atctttacttttgaagaaccggtaatgaccataagcgaaagtatcggcatgatggaagta
aaggttcttcgtacctcaggagcgcggggtctagtggtcgtaccctacaagaccatggag
ggtacagcaaaaggagggggagaagactttgaagatacgcacggagcgctggaattccag
aacgatgagattttcaaatctatacagatcaatataatcgatgacgaggagtatgagaaa
aacaagaacttcttccttgagatgggagagcctcagctgctggagatgagtgagaggaaa
gctgtgttgcttcaagaaattggtggattcgtgaagacagacaaaaggctttatggcagg
gacgtctaccggaaagtgcagggtagggataaccctgtccctgccaccattatcagcctt
gcagaggaaggggacgaggaagctctctctaagaaggaggaggaggaacgccgcatcgct
gagatgggccggcccaccctgggggagcacgtcaaactggaagtcgtcatcgaggagtcg
tatgagttcaagaacacagtggataaactgattaagaagaccaacttggctctattgatt
ggaaccaatagctggaggcagcagtttatggaagctatcacagtcagctctggcgatgat
gacgaggacgagtgcggcgaggagaagctgccctcctgctttgattacgtcatgcacttc
ctcaccgtcttctggaagctcctgttcgcatttgtgccgcccaccgactactggaatggc
tgggcctgcttcgtggtctccatcagtatgattggcctgctcaccgccttcattggagac
ctggcctcccactttggctgtaccgtgggcctcaaggactccgtgaccgccgtggtgttt
gtggcgctcgggacgtctgtgccagacacatttgccagcaaggtagctgcaatccaggac
cagtatgccgatgcctccatcggcaacgtaacgggcagcaatgccgtcaacgtcttcttg
ggcatcggcgtggcctggtccatcgctgccatctaccacaattccaagggcaacgacttc
cgggtggacccgggcaccctggccttctccgtcaccctattcaccatcttcgcctttgtc
gccgtggccgtgctcatgtaccggcgccggcccgagattgggggcgagctgggtgggccc
cgtggccccaaaatcgcaaccacatgtctcttcttcagcctgtggctcatgtacatcgtc
ttctcctccctggaagcttattgccacgtcaagggcttctaa
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