Oncorhynchus tshawytscha (Chinook salmon): 112230517
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Entry
112230517 CDS
T05605
Name
(RefSeq) transmembrane channel-like protein 2-A
KO
K21988
transmembrane channel-like protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112230517
03037 Cilium and associated proteins [BR:
otw03037
]
112230517
Transporters [BR:
otw02000
]
Other transporters
Pores ion channels [TC:
1
]
112230517
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112230517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
Strabismus
Motif
Other DBs
NCBI-GeneID:
112230517
NCBI-ProteinID:
XP_024252567
LinkDB
All DBs
Position
LG33:21358623..21368056
Genome browser
AA seq
955 aa
AA seq
DB search
MPRKSDVGAKIEDVGIEIDGDVSDSEDDTSRRRGNRRPTAGRGGARGRGKKPADEDEEDE
EEEEAPRNRRGANKKKAAKSRDTDDESEDDTPKRRQGRAANKGAANKKKGGKAQDNDEDS
EEEKGNKRNKKGATGKKGKEEETKDKKGDAKGKGKGKEKEDEKDKKKKKNSSDTDSNTNS
EEESMSEGEMERLKEEVEEKKKVIAIMRNKPWRMKRRLVHLKECQEFVDKFEGALGKGKG
RKFYAYKVMMTKKWIKFQRDFENFKTTCIPWERKIKEVESHFGSSVASYFIFLRWMYGMN
MVLFGLTFGLVVIPEVLMGLPYGSIPRKTVPRAEQSTAQDYSVLMDFNGYCKYSVLFYGY
YNNQRTIGLLKFRLPLSYLMVGVGTFGYSLMVVIRTMAKNADVGGGDGDDGEFTFAWKMF
TSWDYLIGNAETADNKYASITTSFKESIVDEQENQKDENIHLRRFLRVLANFMIICCLGG
SGYLIFFVVKRSQEFANRDDLSWYEKNELELIMSLLGLVCPPLFETIAELEEYHPRIALK
WQLGRIFALFLGNLYTFLFALFDEVNNKLEEEVSIRNASIWAQKEYYANFTLYNNDTDTT
PPPMDPSDVIRGPCWETAVGIEFVKLTVSDIQVTYLTILIGDFARAVIVRFLNYCWCWDL
EATYPSYGEFDISGNVLGLVFNQGMIWMGAFYAPGLVGINVLRLLSSMYYQCWAVMATNV
PHERVFKASKSNNFYMGLLLLILFLSLLPVVYTIMTLPPSFDCGPFSGKAKMFDVIMETI
DLDLPAFLGTLMGYAANPGLIIPAVLLMVLAIYYLNSVSEAYQHANAELKKKMQMARDEE
KNRRNNTESTDQVMKDLEDLLPNRSLLPPAPPPETGADNKADQGGKSTKVRPGTAGKDVN
LQKDVSLSSPNPNARGAVTRPPGPRGPGPLPGNGQQGPGGGPGRGRGRGQPPPRR
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggaagagtgatgtgggggcgaagattgaggatgttggaatcgagatcgatggg
gacgtgagtgacagtgaggatgacaccagtcgaaggagagggaacagaagaccgacagct
ggcagaggaggagcccgcggcaggggcaaaaagccagctgatgaggatgaggaggacgag
gaggaagaggaggcccccagaaaccgcagaggagccaacaagaagaaggctgctaagtca
cgtgacaccgacgacgaaagtgaggatgacacccccaagagaagacaaggaagagcagca
aataaaggagcagcaaacaaaaagaaaggaggaaaggcccaggacaatgacgaggacagc
gaggaggagaaggggaacaagagaaacaagaagggagccacgggaaagaaggggaaagaa
gaggagaccaaagataagaaaggagacgccaaagggaagggcaaaggaaaggagaaggaa
gacgagaaggacaagaagaagaagaagaacagctcagacacagactctaacacaaactca
gaggaagagtccatgtcagagggagagatggaacgactgaaggaggaggtggaggagaag
aagaaggtcatagctattatgaggaacaagccctggcgaatgaagaggcggctggtacat
ctgaaagaatgtcaagaatttgtggataaatttgaaggggctctgggaaaaggaaaaggc
aggaagttttatgcttataaagtcatgatgacgaagaaatggatcaaattccaaagagat
tttgagaatttcaaaacgacttgcataccatgggaacgaaagataaaagaggttgaaagt
cactttgggtcctcagttgcttcctacttcatcttcctgcgctggatgtatggcatgaac
atggtcctctttggcttaaccttcggactggttgtgatcccagaggttctgatgggactt
ccatatggatccattcccagaaagacagtgcccagagctgagcagtccactgctcaagac
tactctgtcctcatggacttcaacgggtattgcaaatactcagtcctcttctatggttac
tacaacaaccagaggaccattgggctgctgaagttccgcctcccgctgtcttacctcatg
gtaggagtggggacttttggctacagcctgatggtggtgatacgaacaatggctaagaat
gctgacgtggggggaggggatggagatgacggggagttcacctttgcctggaagatgttc
accagctgggattacctcatcggcaacgccgagacggctgacaacaagtacgcctccatc
accaccagcttcaaggagtccattgtggatgagcaggagaaccaaaaggatgagaacatc
cacctgaggaggttcctgcgtgtgctggccaacttcatgatcatctgctgcctgggagga
agtggctacctcatcttctttgtggtgaagaggtcccaggaatttgccaacagggacgac
ctgagctggtacgagaaaaacgagttggagctcatcatgtccctgttgggcctggtgtgt
cctcccctgtttgagaccatcgctgagctggaggagtaccacccccggatcgccctcaaa
tggcagctggggcgcatctttgccctctttttgggaaacctctacactttcctgtttgcc
ctgtttgatgaggtcaacaacaagcttgaggaggaggtgtccattaggaatgcgtccatc
tgggcccagaaggaatactacgctaacttcaccctctacaacaatgacacggacaccacc
ccgccccccatggacccctctgacgtcatcagggggccatgctgggagaccgccgtcggc
atagagtttgtgaagctgaccgtgtcagacatccaggtgacctacttgaccatcctgatt
ggtgactttgcgcgggctgtcattgtcaggttcctcaactactgctggtgctgggacctc
gaagccacatatccatcgtatggagagtttgacatcagtggcaacgttcttggcctggtc
ttcaaccaaggaatgatctggatgggtgcattctatgctccagggctggtagggataaac
gtcctgcgtctcctctcctccatgtactaccagtgctgggccgtaatggccactaacgtg
ccccatgagagggtcttcaaagcctccaaatccaacaacttctacatgggcctcctcctt
ctcatcctctttctcagtctactgcctgtggtctacaccatcatgactttgccaccctcc
tttgactgtgggccattcagtgggaaggccaagatgtttgatgtcatcatggagacgata
gacctggacctgcctgcctttctgggaacactgatgggctatgcagccaaccctggcctc
attataccagctgtgctactgatggtactggctatctactatttgaactcggtatctgag
gcgtaccaacatgccaatgcggagctgaagaagaagatgcagatggcaagagatgaggag
aagaacaggaggaacaacactgaaagcacagaccaggtcatgaaggacctggaggacctg
ctccccaaccgctctctcttgcccccagctcccccaccagagacaggtgcagacaataaa
gcagaccaaggtggaaagtctacaaaggtgaggccaggaactgcaggcaaggatgtgaac
ctgcagaaagacgtgtccctgtcatcaccaaatcccaacgctcgaggcgcagtgacccgc
ccaccgggtccccgggggcctggacctctgcctggaaatggtcagcaggggccaggaggg
ggaccagggcggggacgggggagaggacagccacctccaagacgctag
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