Oncorhynchus tshawytscha (Chinook salmon): 112230590
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Entry
112230590 CDS
T05605
Name
(RefSeq) ras-related protein Rab-39B-like
KO
K07925
Ras-related protein Rab-39B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112230590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112230590
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
otw04031
]
112230590
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
112230590
GTP-binding proteins [BR:
otw04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
112230590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
AAA_22
Motif
Other DBs
NCBI-GeneID:
112230590
NCBI-ProteinID:
XP_024252629
LinkDB
All DBs
Position
LG33:31072475..31081332
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AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAHVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFLL
VGHKCDLEPQRQVSQQEAEKLAGTYGMRYVETSARDAINVEKAFTELTRDIFELVKSGDI
NIQEGWEGVKSGLVPNVVHSSEEVTKSGRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgatatggctgtaccagtttcgactcatcgtcattggggactcgacagtagga
aagtcgtgcctgatccggcgattcacagagggacgctttgcgcatgtgtccgaccccaca
gtcggtgtagacttcttctcacgcctagtggagatagaaccaggcaaacgcattaaactt
caaatctgggacacagccggacaagagcgattcaggtctattaccagggcttattaccgt
aactctgttggggggctgctgctgttcgacatcaccaaccgtcgctccttccagaatgtg
catgagtggctggaggaggcccggagtcacgtccagcctcacagcatcgtctttctgttg
gtgggccacaagtgcgacctggagccccagaggcaggtgagccagcaagaggcggagaag
ctggcaggtacctatggtatgcgctacgtggagacatcggctcgtgacgccatcaacgtg
gaaaaggccttcactgagctaacgcgggacatctttgagctcgtgaagagcggtgacatc
aacatccaggagggttgggagggggtgaagagtggcttggtgcccaacgtggtgcactcc
tcagaagaggtcaccaagagcggccggcggtgcctctgctga
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integrated database retrieval system
