Oncorhynchus tshawytscha (Chinook salmon): 112230627
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Entry
112230627 CDS
T05605
Name
(RefSeq) claudin-4-like
KO
K06087
claudin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112230627
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112230627
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112230627
04147 Exosome [BR:
otw04147
]
112230627
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112230627
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
112230627
Exosomal proteins of colorectal cancer cells
112230627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
112230627
NCBI-ProteinID:
XP_024252668
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All DBs
Position
LG33:38425980..38435470
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AA seq
410 aa
AA seq
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MPHRERGDTDKDKRPYSFTQTRRQTEKPTPTGSNMVSAGLQMLGTALGVIGWIGTIIECA
MPMWRVSAFIDSNIITSQVIWEGIWMSCVVQSTGQMQCKIYDSMLALSQDLQAARAMTVI
AILSGIIAILLAVAGGKCTNCVEDEASKAKVGVASGVVFIIAGVLCLIPVCWTAHSIIQD
FYNPHLVSAKKRELGAMASQGLQIMGVMLAMIGWLGTILTCAMPMWRVTAFVGANIVTAQ
VIWEGLWMNCVVQSTGQMQCKVYDSMLALPQDLQAARAMVIVAVIVGVCGVMMAIVGGKC
TNCMEDEAAKAKACIIAGIVFIICGLLIFIPVSWSANTLIRDFYNPLVIEAQRRELGAAL
YIGWGSAGLLLLGGGLLCCNCPPKEGNMGRPYVAAKFAPVRTTSPSMNYV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgccacatagagagagaggagacacagacaaagacaaaaggccatacagtttcactcag
acacgcagacaaacagagaaaccaacgcctaccggatccaatatggtgtcagctgggtta
cagatgctgggcacggccctgggggtcattggctggatcgggactatcattgaatgcgcc
atgcccatgtggagggtctccgccttcattgacagcaacatcatcacctctcaggtcatc
tgggagggtatctggatgagctgcgtggttcagagcacgggccagatgcagtgtaagatc
tatgactccatgttggccttatcccaggaccttcaggctgccagagccatgactgtcatc
gccatcctctccggcatcatcgccatcctattggctgtagccgggggaaagtgtaccaac
tgcgtggaggacgaggcatccaaggctaaagtgggcgtggcgtctggggtggtgttcatc
attgctggggttctgtgtctgatccctgtctgctggacggcccacagcatcatccaggac
ttctacaacccgcacctggtaagcgctaagaagagggagctgggggccatggcttcccag
ggcctccagattatgggagtaatgctggctatgattggctggctggggaccatcctcact
tgtgccatgcccatgtggagggtcactgcctttgtcggagccaacatcgtcaccgctcag
gtcatctgggaagggttatggatgaactgcgtggttcagagcacgggccagatgcagtgt
aaggtctatgactccatgctggccttaccccaggacctccaggccgccagagctatggtc
atcgtggcagtgattgtgggcgtctgcggcgtcatgatggccatcgtcggggggaagtgc
accaactgcatggaggacgaggctgccaaagccaaagcctgcatcatcgccgggatcgtc
ttcatcatctgtggcctcctcatcttcatccctgtgtcatggtcggccaataccctgatc
agagacttctataaccccttggtgatagaggcccagaggagggagctgggggcggctctg
tacatcggctggggctccgcagggctgctgctgttgggagggggtctgctctgctgcaac
tgcccccccaaggagggcaacatgggcaggccatatgtggcggctaagttcgcccccgtc
cggaccacatctccatccatgaactatgtgtga
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