Oncorhynchus tshawytscha (Chinook salmon): 112230643
Help
Entry
112230643 CDS
T05605
Symbol
pacs1a
Name
(RefSeq) phosphofurin acidic cluster sorting protein 1a isoform X1
KO
K23290
phosphofurin acidic cluster sorting protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112230643 (pacs1a)
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Others
Others
112230643 (pacs1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pacs-1
Motif
Other DBs
NCBI-GeneID:
112230643
NCBI-ProteinID:
XP_042167424
LinkDB
All DBs
Position
LG33:complement(31507657..31524198)
Genome browser
AA seq
908 aa
AA seq
DB search
MSERGGLPRIGGTPSPHMQPSKTVTISPNRPVQMNLYATWEIDRSSPSCVPRLFTVTLKK
LLMLQELDRDLTSVVIAVKLQGSKRILRSNEILLASAGLTETDLQLTFSLQYPHFLKRDA
NRLQIMLQRRKRYKNRTILGYKTLALGLINMAEVMQHPSEGARVLALHTTVKDTAVTVAE
MRVYSLSSQPIDYEVSKAKLSDRSPDIDNYSEEEEESYSSEQDGSDDPAHIQYLFDEEDD
MRKKKHRRKLTSAASITRGHPNIKQKFVALLKRFKVSDEVDFGLKHVSQEHICDVEEDLD
ELYDSLEMYNHSDSGPEMEETDSILSTPKPKLRPFFEGISQSSSQTEFGSLNSRCSLPKD
TLSPQGDQPQSGKMNCTRSRNLDDSKTDTQELIDPKGLLETTACITVSVPEKLPRTPTRE
LRSSNSESHTTMPSPRLNGGHTPRQRRGTPMKERRALSKPLSERTNSSDSERSPELSRTP
QVPRKAVYDQLNLVFSSDTALPDSLVLVNTSDWQGQYVSEVLLVQKQPVVCTCCGVEIQA
VLTTLLTRIQKFCNCNSSTPPPVKVVVAGGQSYLGAVLHVFVSQLANKTSDWLSLIHFLV
VPLGCHPVAKHLASLDPRYSSVFLDNAWKDLFSGLEPPRSTADGVDVAARIRQYISGVSV
THQLPIAEAMLTCENKRYDEDSYQKFVPFVGVVKVGLIEPTLAYSGGDTEEAVSVSLAVP
STSPQSHGSPTGMPREAATPPSPSLSSGLVSPNMSHGVDTIGLTVDYWVATCSERKKDGE
RCDKGSKNTLKSAFCSLQVSRLPGGGSTENQPQANTMAMTMVTKEKNKKVSTIFLGKKPK
ERDVDCKSQVVEGITRLICSTKQQQTSLKVSVDGVEWTDVKFFQLAAQWPTHVKYLPVGL
FGYNKPAT
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagagagggggtctcccgcggattgggggcacgccatctccacatatgcagccg
tccaagacagtaactatctccccgaaccgtccggttcaaatgaacctgtatgcaacctgg
gaaattgatcgctcatctccaagctgtgtgcccaggctcttcactgttaccctgaagaag
ctgctgatgcttcaggagctggacagagacctaacctctgttgtcattgcagtcaaactc
cagggatctaagcgcattttacgttccaatgagatcctgttggcatcggctggactgaca
gagactgatcttcagctgacattctccttgcaatatccacattttttgaaacgagatgcc
aacagactgcagatcatgttgcagaggaggaagaggtacaagaaccgcaccattctgggc
tataagaccctggctctgggccttatcaacatggcagaggtgatgcagcatcccagtgag
ggagcccgtgtgttggctctccacaccacagtgaaggacacggctgtgactgtggctgag
atgagggtctactcgctctccagccagcccatcgactacgaggtgtccaaggccaaactg
tcagaccgctcccctgacattgacaactactctgaggaagaggaagagagctattcatca
gagcaggacgggagtgatgaccctgctcacatccagtatctgttcgacgaagaagatgac
atgaggaagaagaagcacagacgcaaactcacctctgcagcctccatcaccagaggtcat
cccaacatcaagcagaagtttgtggccttgttgaagaggtttaaagtgtctgatgaggtg
gactttggcctgaagcacgtgtcccaagagcacatctgtgatgtggaggaggacctggat
gagctctatgacagtctagagatgtacaaccacagtgacagcggcccagagatggaggag
acggacagcatcctcagcacacccaaacccaagctcaggcccttctttgagggcatatcc
cagtccagctcgcagaccgagtttggcagtctgaacagcaggtgcagtctgcccaaagac
accctgagcccacaaggagatcagccccaatcaggcaagatgaactgcactcgctcccgc
aacctggatgactctaagacagacactcaggagctgattgatccgaaggggttactggag
acaaccgcctgcatcactgtctctgtcccagagaagctacccaggaccccgacgagggaa
ctgaggagcagcaacagtgagagccacaccaccatgccctcccccaggttgaatggtggg
cacacacccaggcagagacgtgggacgccaatgaaggagaggcgagcgctgtccaaacca
ttgagcgaacgcaccaacagctctgacagcgagaggtcaccagagctcagccgcacccca
caggtgcccaggaaggctgtgtatgaccagctgaatctggtcttctcctcagacactgcc
ctaccagacagcctagtcctggtcaacaccagtgattggcagggacagtatgtgtctgag
gtgctactggtccagaagcagccagtagtgtgtacctgctgtggggtggaaattcaggct
gtcctcaccaccctcctcacacgcatccagaagttctgtaactgtaactcgtccacgccg
ccgccggtcaaggtggtggtggcagggggacagagctacctgggggccgtcctacacgtc
tttgtcagtcagctggccaacaaaacatccgattggctcagcctcatccacttcctggtt
gtccccctgggctgtcaccctgtagccaagcacctggcctccctggaccctcgctacagt
tctgtgttcctggacaatgcctggaaagatctgttcagcggcctggagccccctcgctcc
actgcagacggagtggacgtggcagcaaggatcaggcagtacatcagcggcgtctctgtc
acacaccagttacctatcgctgaggccatgctcacctgcgagaacaagagatatgacgaa
gactcttaccagaagtttgttcccttcgttggggtggtgaaagtagggttgattgaacca
actctggcgtattcaggtggagacactgaggaggcagttagtgttagcttggctgttccc
tctacctccccacaatctcatggatctcccacagggatgcccagagaggctgccacaccc
ccatctccctccctgagcagcggactggtgagcccaaatatgtcccatggggtggacacc
attgggctgacggtggattattgggtagcgacatgctcagagcggaagaaggatggggag
cggtgtgacaagggctccaagaacacgctgaagagtgccttctgctccctgcaggtcagc
aggctgccaggagggggctccactgagaaccagccccaggccaacaccatggccatgacc
atggtcaccaaggagaagaacaagaaagtctccaccatattcctgggcaagaagcccaaa
gagagggatgtagactgtaaaagccaggtggttgagggcatcaccagactcatctgttct
accaagcagcagcagaccagcctaaaagtgtctgttgacggtgtggagtggactgatgtc
aagttcttccagctggctgcccagtggcccacccatgtgaagtacctgccagtggggctg
tttggttacaacaagcccgccacctag
DBGET
integrated database retrieval system
