Oncorhynchus tshawytscha (Chinook salmon): 112230666
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Entry
112230666 CDS
T05605
Name
(RefSeq) steroid hormone receptor ERR1-like isoform X1
KO
K08552
estrogen-related receptor alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112230666
03029 Mitochondrial biogenesis [BR:
otw03029
]
112230666
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112230666
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
112230666
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
112230666
Nuclear receptors [BR:
otw03310
]
3. Estrogen like
3B. Estrogen-related receptor
112230666
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
112230666
NCBI-ProteinID:
XP_042166947
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Position
LG33:35783581..35796029
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AA seq
474 aa
AA seq
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MLATLCSLSTTQTCAIISPRESKYLGNSSYIEGESLLTSVIMSSRERRSDLYIKAEPSSP
EGGGGGRASPGGASSDSSQSGGGGTRGDGVGRYSPPLYTPALRCHFKEEGGDGAEEGSTG
SGGGRCKYALSTLPKRLCLVCGDVGSGYHYGVASCEACKAFFKRTIQGNIEYSCPASNEC
EITKRRRKACQACRFTKCLKVGMLKEGVRLDRVRGGRQKYKRRPEVENATYQSTPLPLRK
EGEKGSSNIIVSHLLVAEPEKLFAMPDPLQPDTAQRTLTTLCDLADRELVVIIGWAKHIP
GFLSLSLADQMSVLQSVWLEVLVLGVAFRSLGCEDEVVFAEDFVLDEEMSRVAGLTELNA
AISQLARRFRSLQLDREEFVMLKAIALTNSDSVYIEDMEAVQKLRDLLHQTLLEMECQRH
PEDPQRVGRLLLTLPLLRQTAGRALTTFYSIKTRGGVPMHKLFLEMLEAMMDSP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgttagctacgttgtgtagcctctcaacaacacaaacctgcgcgataatatcgccgagg
gaaagcaaatacttggggaactcaagctacattgagggagagagcttgctgactagcgtg
atcatgtcttccagggagcgtcggtcagacctgtacatcaaggcagagcccagcagtcca
gagggaggtggtgggggccgggccagcccagggggagcctcctcagactcctcccagagt
ggtggaggtgggacaagaggagacggggttgggcgctactcaccccctctgtacacaccg
gccctgcggtgccacttcaaggaggagggtggtgatggggcggaggagggatccacaggt
agcggaggagggcggtgcaagtatgccctgagcacactacccaagagactgtgtttagtg
tgtggagatgtaggatctggctaccactacggtgtagcctcgtgtgaagcctgcaaggcc
ttcttcaagagaaccatccagggtaacatcgaatatagctgtcctgcgtcaaacgaatgt
gagatcaccaagaggcgcagaaaggcttgccaggcgtgccgcttcaccaagtgccttaaa
gtaggcatgctgaaagagggagtccgtctggaccgggtcagaggagggagacagaagtat
aaaaggcgtccagaggtggagaatgcgacctaccagagtacccctctaccgcttaggaag
gaaggggagaaaggctcctccaacatcatcgtgtcccacctcctggtggcagagccagag
aaactgtttgccatgcctgaccccctgcagcctgatacggctcagcgcacactcaccacc
ctctgtgacctcgccgaccgcgaactggtcgtcatcatcggttgggccaaacacatcccc
ggcttcctgtcgctgtctctggcagaccagatgtcggtgctgcagtcggtgtggttggag
gtgctggtgctgggtgtggccttccgctccctgggctgtgaggatgaggtagtgttcgct
gaggactttgtccttgacgaggagatgtcccgcgtggctggactgacagagctcaacgca
gccatcagccagctggcccgacgcttccgctccctgcagctggaccgggaggagtttgtc
atgctcaaagccatcgcactcaccaactccgactctgtatacatagaggacatggaggca
gtgcagaagctgagggacctcctccaccagaccctgttggagatggagtgccagcgacat
cccgaggacccccagcgggtggggcgcctcctcctcaccctccccctcctccgccagaca
gctggtcgcgccctcaccaccttctacagcatcaagacccgaggtggcgtgcccatgcac
aaactcttcctagagatgctggaagccatgatggactcgccctag
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