Oncorhynchus tshawytscha (Chinook salmon): 112230697
Help
Entry
112230697 CDS
T05605
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X1
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00603
Glycosphingolipid biosynthesis - globo and isoglobo series
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
112230697
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112230697
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
112230697
Glycosyltransferases [BR:
otw01003
]
Glycan extension
FORS blood group (Forssman antigen)
112230697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Motif
Other DBs
NCBI-GeneID:
112230697
NCBI-ProteinID:
XP_042167301
LinkDB
All DBs
Position
LG33:39376024..39431172
Genome browser
AA seq
408 aa
AA seq
DB search
MIRNLLDISAAITHPVLEEFFFNESDGKYLLQTLDQALIPVFRRRKRRRHGERRSGCLVR
IRRREEREHWLLALVIAGGMVLCWLVFSRCTSVSLNEVLSEYVEGLTWRQVNHQVVLNHR
LQSNQAKLMEPVRTDVLTVTPWLAPIVWEGTFDPLVIDEAFRSHNLTIATTVFAVGKYTR
FLRDFLESAEKHFMVGLDVHYYVFTDLPGDVPSNVTLGVGRLLSIVSVPKFDRWQEISLR
RMEFIQTAIEDHIHREAHYIFCLDVDMRFHGRVGSEVLGRLVAAIHPWFYMYPRSQYPYE
RRAVSTASVPQDQGDFYYQANIFGGVLEDVHRLTKTCRENLEVDKSVGVEAVWQEESHLN
WYLVKNKPTKLLSPEYVWDDARGRDTKEIKLIRFSSVIKNKADVRENP
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgatacgaaatcttcttgatatcagcgcagcgattactcaccccgtactggaggaattc
ttcttcaacgagtcggacgggaagtatttactccagacacttgaccaggccctcatcccc
gtctttcgtaggcggaaaagacggcggcatggtgaacgacggtccgggtgccttgtaagg
atccgtcgccgagaggagcgtgaacactggttacttgctttagtaatcgctgggggaatg
gttctctgctggcttgtcttctcacgctgcacatcggtctctctcaatgaggttctcagt
gagtatgtggaggggttaacatggcgccaggtgaatcaccaggttgtgctgaatcacaga
ttacagagcaatcaagccaagcttatggaaccagtgaggactgacgtgctgactgtaacc
ccatggctggctcctatagtctgggaggggaccttcgaccccctggtcatagacgaggcc
ttcaggtcccacaacctcaccattgctaccactgtgtttgctgtagggaaatacactcgt
tttctccgtgacttcttagagtcagctgagaagcacttcatggtggggctggatgtgcac
tactacgtgttcaccgacctgcccggcgatgtgcctagcaacgtgactcttggtgtcggc
aggctgctcagcatcgtgagcgtgccgaagttcgaccgctggcaggagatatccctccgc
cgcatggagttcatccagactgccattgaggatcacatccaccgggaggcgcactacatc
ttctgcctggatgtagacatgaggttccatggccgtgtgggatccgaggtgctggggaga
ctggtggccgccatccacccctggttctacatgtacccccggagccagtacccctacgag
cggcgggctgtgtccacggcctctgtacctcaggaccagggagacttctactaccaggcc
aacatattcggaggagtgctggaggatgttcataggctgaccaagacgtgcagggagaac
ctggaggtggataagtctgtgggtgtggaggctgtgtggcaggaggagagtcacctgaac
tggtacctggtgaagaataagcccaccaagctgctgtcacctgaatatgtgtgggacgac
gctagaggacgggacaccaaggagataaaactcatccgcttctcctctgtcatcaagaac
aaggcagacgtcagggagaacccatga
DBGET
integrated database retrieval system
