Oncorhynchus tshawytscha (Chinook salmon): 112230757
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Entry
112230757 CDS
T05605
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112230757
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
112230757
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
112230757
NCBI-ProteinID:
XP_024252792
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Position
LG33:complement(3058487..3157146)
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AA seq
1218 aa
AA seq
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MSGKIESKQDSQRSHLSSFTMKLKDRFHSPKIKRTPSKKGKQLQVEPAVKSQEKPVNKKV
SRLEEQEKEVVSALRYFKTIVDKIMVEKKVLEMLPGSASKVLEAILPLVQVEARITHSSA
VSSCHNRVYQSLANLIRWSDQVMLDDIDLDDKDNVVAVTTVIKAVLDGVKELVKLTIEKQ
EQPSPTTLNKPLPPIATPESTSELPLTEREREILSKTTPTVPPTEAMTNMAEEDIAPPKP
PLPSLKMDALRAHLATDHFVAAQRRSTKTDTPPPALPPKKRQSAPSPTRVAVVSPMSRGS
SLPCSVHRRQQDYEQEFLQRRFSGGSQSYRGNSPRLSPCSSIGKLSKSDEHLCSMEQDSG
RCSQNTSCETLDNTESYDPDYDFLHQDLSVFTGDPLAPSGVTSLSPLPESHSESSSPVPP
PTRFSSPPAPHPHHSEYWTPQPGSHISPLHPCRLSAPPALPQKKRRSAQVSPYPDGCWGG
SSRGPLYERFPSQYDNLSEEELLHPTPPFPLFTPISPMPQSNGGVFVAQYLASENADVPS
SPPPLPEKRNKHVLAYMQFVEDYSEPQPSVFYQTPQSESIYEQRNKRFQDVYGLNDSFSS
TDSVHEPLPVPLFPPPALPPKQRQLASHSSAPCSSSSSSLPCHLHPSLVAAAEEVGSGLG
LSLSVSSSSCLSGHSSLTMPMSSDQVALVNATLLAGSGDGPDCSLANLLGSVAVCLPSSE
TTSLLTDSLLHTSAVSVDEGGEGEYVNLYASSQANGELPLCLREPNSADDVLEDPSPQMP
SSNSKEALDKDRRQKSTDSAPCDEEVDELSLIDHKEIMSRITLKQENDDGPDVRAGSGDI
LLVHATETERKDLVLYCEAFLTTYRTFISPEDLIKKLHYRYTRFCHSPDTFKKRVSKNTF
FVLVRVVDELCLVELTEDILKQLMDLVFRLVCNGELSLARVLRKNILDKVEQKKLLRCTN
SLKPLAARGVSARPGTLHDFRSHEIADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNL
TQFTEHFNNMSYWVRSLIIQQEKGQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSA
PIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALADVEPPCIPYLGLILQDLTFVHLGN
PDLIDGKVNFSKRWQQFNILDSMRRFQQVHYELKRNDDIVCFFNDFSDHLAEEALWELSL
KIKPRNITRRRTEREEKT
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaaaatagagagcaagcaagactcgcagcgctcccacctttcctccttcacc
atgaagctgaaggacaggttccactctccaaagatcaagaggaccccatcgaagaagggc
aagcagctgcaggtcgagccagccgtcaagagccaagagaaacctgtcaacaagaaggtg
agtcggctggaggagcaggagaaggaggtggtgagcgctctgcgttacttcaagaccata
gtagacaagattatggtggagaagaaggtgctggagatgttgcctggctcggccagcaag
gtcctggaggccattctacccctggtgcaggtagaggcccggataacacacagttcggcg
gtgtcgtcgtgtcacaaccgtgtgtaccagagcctggccaacctgatccgctggtccgac
caggtcatgctggatgacatcgacctggacgacaaggacaacgtggtcgcggtcaccacc
gttatcaaggctgtgctagacggggtcaaggaactggtcaaactcaccatagagaaacag
gagcagccctcacccaccactctcaacaaaccactaccacctattgccacacctgagagc
acatccgagttgcccctgacggaacgggagcgggagatcctgagtaagaccacgcccact
gtcccgcccaccgaggctatgacgaacatggcagaggaggacatagccccgcccaaaccc
cccctccctagcctgaagatggatgcgctcagagcacacttggctactgaccactttgta
gctgcccaaaggagatccacaaagactgacactcctcctccagccctgcccccaaagaag
cgccagtcggccccgtcgcccacccgggtggcagtggtgagccccatgagccgtggctcc
agcctgccctgcagcgtccatagacggcagcaggactatgagcaggagttcctccagagg
cgtttctcaggcggtagccagtcgtacaggggcaactccccgcgcctctcgccctgcagc
agcataggaaagctcagcaagtctgacgagcatctctgctccatggaacaggacagcgga
cggtgctcccaaaatactagttgtgagacgctggacaacacggagagttatgacccggac
tatgacttcctccaccaggacctctcagtcttcactggggaccccctcgccccctcaggg
gtcacctctctgtcgcccctccctgagtcccacagcgagtcatcctcccccgtccctcct
cccacccgctttagctccccacccgccccccaccctcaccactccgaatactggaccccc
cagcccggttctcacatcagccccttgcacccttgccgcctcagcgcgcctccagcgtta
ccccagaagaagcggcgcagcgcccaggtgtcgccctatccggacgggtgctggggtggt
tcctcgcgggggcccctctacgagaggttcccctcgcagtacgataacctgtcggaagag
gagctgctgcaccccacaccccccttccccctcttcacgcccatctcacccatgccccag
agcaacgggggcgtgtttgtggctcagtacctggccagcgagaatgcagacgttccctct
agtccaccgccgctgcccgagaagaggaacaagcacgtcctggcgtacatgcagtttgtg
gaggactactcggagccccagccctccgtgttctaccagacgccgcagagcgagagcatc
tacgagcagaggaacaagcgcttccaggacgtctacggcctcaatgactccttcagcagc
accgactcggtccacgagcccctgcccgtacccctcttcccgcctcccgccttgcccccc
aagcagaggcagctggcctcccactcttccgccccctgttcttcctcatcctcctctctg
ccgtgccacctccacccttcattggtggcggcagcagaggaggtgggctctggcctgggg
ctcagcctatcggtctctagctcctcctgccttagtggacactcctcgctgaccatgccc
atgagctcggaccaggtcgccttggtcaatgccaccctattggctggcagcggggatggg
cccgactgttccctggccaacctattgggctctgtggccgtctgtcttccttcctctgag
accacttctcttctcactgactctctcctccacacctcggcagtgagtgtggacgagggt
ggcgagggtgagtatgtcaacctgtacgcatccagccaggccaacggggagctgccactc
tgcctcagagagcccaactctgctgacgacgtccttgaagacccctctccacagatgccc
tcttccaatagcaaggaggctctggacaaggacaggaggcagaagtcaacagactctgcg
ccttgcgacgaggaagtggatgagctctctctcattgaccacaaagagatcatgtccagg
attacactaaaacaagagaatgatgatggtcctgacgtgcgtgctggatcaggggatatt
ctgttagtccacgccacagagacggaacgcaaagatctggtgttgtactgtgaagccttc
ctgaccacatacaggacattcattagcccagaggacctcattaagaagctgcactacaga
tataccaggttctgtcacagtccagacacatttaagaagcgggtcagcaagaacacgttc
tttgtgctggttcgagtggtggatgagctgtgtctggtggagttgacggaggacatcctg
aagcagctgatggacctggtgttcaggctggtgtgtaacggcgagctgagcctggcccgc
gtgctccgcaagaacatcctggacaaggtggagcagaagaagctgctacgctgcaccaac
tctctcaagccgctggccgcccggggcgtgtccgccaggcccggaacgctgcatgacttc
cgcagccatgagattgccgatcagctcacactactggatgcagaactgttctacaaaatt
gagattcctgaggtgttgctttgggccaaggagcagaatgaggagaagagtccaaatctg
actcagttcacagagcactttaacaacatgagctactgggtgcgctctctaatcattcag
caggagaaaggccaggaccgagaaaagctgctcctcaagttcatcaagatcatgaagcac
ttacggaagttgaacaatttcaactcatacttggcaatactgtctgccctggactcggcc
cccatccgcaggctagagtggcagaaacagacctcagagggattggaggaatactgtacg
ttgattgacagctcgtcgtctttcagagcgtaccgggcggctctggccgacgtggagcct
ccgtgcatcccataccttggtttgatcctgcaggacctgaccttcgtccacctggggaac
ccggacctcatcgacgggaaggtcaacttctccaagcgctggcagcagttcaacatcctg
gacagtatgaggcgcttccagcaagtgcattacgagctgaagcgcaatgacgacatagtc
tgcttcttcaacgacttcagcgaccatctggccgaggaggcattgtgggaactctcactg
aagatcaagcctcgcaacatcacccggcggcggacggagcgcgaggagaagacttag
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