KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112230773
Entry
112230773         CDS       T05605                                 
Name
(RefSeq) histone H2A.V isoform X1
  KO
K11251  histone H2A
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082  ATP-dependent chromatin remodeling
otw04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    112230773
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    112230773
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:otw03036]
    112230773
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112230773
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    112230773
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112230773
SSDB
Motif
Pfam: Histone Histone_H2A_C CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 112230773
NCBI-ProteinID: XP_024252819
LinkDB
Position
LG33:3996129..4002122
AA seq 179 aa
MSRRLDASSCVSCSLWKGWCPLPPPPPRLLPPRSLPLSPSAIFSTANQLLPLAGGKAGKD
SGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLEL
AGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTA
NT seq 540 nt   +upstreamnt  +downstreamnt
atgtccaggcgcttggacgccagctcctgcgtctcctgctctctctggaagggctggtgc
ccgctcccacctccccctccgcggctgctgccaccgcgctcgctcccactgtcaccatcc
gccatcttcagcaccgccaaccagcttctccctcttgcaggaggaaaagctggaaaggac
agtggcaaagccaaggcgaaggctgtgtctcgctcccaaagggctggactccagttcccg
gtgggtcgtatccacagacatctgaagacccgaaccaccagccacggcagagtgggagcc
accgcagcagtatacagcgccgccatcttggagtacctcacggctgaggtgttggagttg
gcagggaatgcctccaaggatctgaaggtgaagcgtatcactccgcgtcacttacagttg
gccatccgcggagacgaggaattggactcactcatcaaggccaccatcgctgggggaggt
gtaattcctcacatccacaagtctctgattggaaagaagggccagcagaagactgcatag

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