Oncorhynchus tshawytscha (Chinook salmon): 112230783
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Entry
112230783 CDS
T05605
Name
(RefSeq) erbin isoform X1
KO
K12796
erbb2-interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
112230783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
PDZ
LRR_LRWD1
LRR_5
PDZ_6
PDZ_2
LRR_NXF1-5
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
112230783
NCBI-ProteinID:
XP_024252840
LinkDB
All DBs
Position
LG33:5603686..5720530
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AA seq
1429 aa
AA seq
DB search
MSSKRNLFVRLVPCRCLRGEEEAVTSLDYSHCSLETVPKEIFSLEKTLEELYLDANQIEE
LPKQLFNCQLLHRLSMPDNDLTVLPAAIANLVNLRELDVSKNSIQEFPENIKNCKVLAIV
EASVNPISKLPEGFTQLLSLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSM
HKLTQLERLDLGSNEFTEVPEVLEQLTGIKELWMDGNRLTFLPGRLGTLKQLSYLDVSKN
NLEMVDEQICGCESLQDLLLSNNALTQLPGSIGSLKKLTALKVDENQLMYLPDSVGGLAA
LDELDCSFNEIEALPSSIGQCVSIRTFAADHNFLTQLPPEMGSWKSATVVFLHSNKLESL
PEEMGDMTKLKVINLSDNKLRNLPYSFTKLNQMTAMWLSENQSKPLIPLQKEEDQETHKT
VLTNYMFPQQTRTEDYIPSSDSESFNPSLWEEQRKQRAQVAFECDEDKDERETPPREGNL
KRYPTPYPDELKNMVKTAQSVAHRLKEDESGKDARPSERNHVGVQDVGVKVIEAPCANGK
PVEMEPKAPVCVQDSTAPLETSESYNSQKTSLRTSDNTRTMNHEDTLESFSLQDSEELSS
EEEEMKMAEMRPPLIEITINQPKVVALSKNKKDDGKDADSLLDETVANSNQNNSNCSSPS
RMSDSVSLTTDSSQDNSLCTPEREAKMPFLPKSRQEDVNMNQRKESTPLLQNGNGSATSL
QALLKTQQGYESKPEKMVVDYDLSMERLAFIEKGNNNGMGDAYTKWDQINMNLAKLPPHP
DNMVVQPDDRPNGSSAKEDFNHLPPPYNNDNSTAPITDHLKNGNQLGDHFNSHSSEGLAV
SPMRVDSATSMVRTASAGVTASSNMSLSRSTEELSPEKRCSPPVVAKAQSITNIEAGVMK
LYSLDAEGGSYEGGVVGRMAGAGPGAQGQSIVRSKSASLLNDQPFQVYSGSSASSSDLLS
SSSKPPVSTGRYPVPSGMAMGPPPQYNVQYSSSTMPKDGLWTQRTPILPDQGFLPPPQHS
LANTNYSNRNQAPPYLLQAQQRGPPTGPAPGDMWAKERHLPLGGQPRSGTLQRQSSSSSS
MGDPRRMQVPEGEYMTYRDIHTLGRGPLAVAQAMQRPLSARTYSIDGPSTPRPQSSRPQP
HELPERTMSVSDFNYQHVSPSKRPNARVKSEHSLLDGPGGPGAGGRVPVDWRDQVMRHIE
AKKMEKNALSRSYNSNYAPLSCSYYGSSRDVHHSGSQGSLVFSAAADGRPYGAQGHCDDV
FGPQGQQGYTMDTLRQVPSLNGQLGGPVRGQMTSCQTPMARHPSREQLIDYLMLKVSHGQ
QPQGPPPPRADHDTLQQEFRVKVEKNPELGFSISGGVGGRGNPFRPDDNGIFVTRVQPEG
PASKILQPGDKILQANGYSFVNVDHGNAVALLKTFPTTVDMIIIRELAA
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaagcggaacctgtttgtgcgtctggtgccgtgccgctgcctgcggggggag
gaggaggcggtgacgtctctggactactcccactgcagcctggagactgtgcccaaggag
atcttcagcttggagaagaccctggaggagctctacctggacgccaaccagatcgaggag
ctgcccaaacaactgttcaactgccagttgctccaccggctgagcatgccagacaatgac
ctcacggtgctgcctgcggccatcgccaacctcgtcaatctcagggagctggacgtcagc
aagaacagtatccaggagtttccagaaaatatcaagaactgcaaagtcctggctatcgtt
gaagcgagtgtgaatcccatctccaagctcccagaaggtttcacccagctcctcagcctg
tcacagctctacctgaatgacgccttcctcgagttccttccagccagcttcggcaggttg
actaaactgcagatcctggagctgagagagaaccagttaaagatgctgccaaaaagtatg
cacaagctcacccagttggagaggctggacttggggagtaacgagttcactgaagtgcct
gaggtattggagcagctcactggaatcaaagagctgtggatggatggaaacagactgacg
ttcctaccagggaggctgggcactctgaagcagctgtcctacctggacgtgtccaagaac
aacctggagatggtggacgagcagatctgtggctgtgagagcctgcaggacctgctgctc
tctaacaacgcactcacacagctgcccggatccataggctccctgaagaaactaaccgct
ctgaaagtggatgagaaccagctcatgtatcttcccgactctgtcggagggctggcagcc
ctggatgagctggactgtagttttaacgagattgaggctctgccctcctccatcggacag
tgtgtcagcatacgcacctttgccgctgaccacaacttcctcacacagctgcccccagag
atgggcagctggaagagtgccaccgtggtgttcctgcactccaacaagctggagtctctg
cccgaggagatgggagacatgaccaagctcaaggtcatcaacctcagtgacaacaagttg
aggaatcttccctacagcttcacgaagctcaaccagatgactgctatgtggctgtctgag
aaccagtcaaagcccctcatccctctgcagaaggaggaggatcaagaaacccacaagaca
gttctcaccaactacatgttcccccagcagaccagaacagaggactacatccccagctct
gacagcgagagctttaacccctccctgtgggaggagcagaggaaacagcgggcccaggtg
gccttcgagtgtgacgaggacaaggatgagagggagacgcctccacgggagggcaacctg
aagcgctacccgacaccatacccagacgagctgaagaacatggtgaagacggcccagtca
gtcgcccacaggctgaaggaggacgagtcagggaaggatgccagacctagcgagcgtaac
catgtgggagtgcaggacgtgggagtcaaggtgattgaggctccctgtgccaacggcaag
ccagtggagatggagcccaaagcgcctgtctgtgtccaggactccacggcacccctggag
acctctgaatcctacaactcccagaagacctctctccgaacctccgacaacaccaggacc
atgaaccatgaggacaccctggagtctttttctctgcaggactccgaggagctttcgtct
gaggaggaggagatgaagatggcggagatgagacctcctctgatcgagatcaccatcaac
cagcccaaagtggtggccctaagtaagaacaaaaaagatgacggtaaagacgctgactcg
ttgctggacgagacggtggccaacagcaatcagaacaacagcaactgttcgtccccgtcg
cgcatgtcggactctgtgtctctgaccacggacagcagccaggacaactccctgtgcacc
cccgagagagaggccaagatgcccttcctacccaaaagcaggcaagaggatgtaaacatg
aaccagcggaaggagagcacccctctcctccagaacggcaatggctcagccacgtccctg
caggccctcctgaagacccagcagggctacgagtctaagcccgagaagatggtggttgac
tacgacctgtccatggagaggctggccttcatcgagaagggcaacaacaacggcatgggt
gacgcctacaccaagtgggaccagatcaacatgaatttggccaagctgccgcctcatccg
gacaacatggtggtccaaccagacgaccgcccgaacggctcaagcgccaaggaggacttt
aaccacttgcctcccccgtataacaatgacaactctacggcgcccatcacggaccacttg
aagaacggcaaccagctgggcgaccacttcaatagccactccagcgagggactggctgtg
tcgcctatgagggtggactctgccacgtcgatggtgcggacggcttctgcgggcgtgacg
gccagcagcaacatgtctctgtctcgcagcaccgaggagctgtccccggagaaacgatgc
tcccctcctgtagtggcgaaggctcagagcatcaccaacatcgaggcgggggtgatgaag
ctgtactccttggacgctgaggggggctcctatgagggtggcgtggtgggcaggatggcc
ggagccggcccgggagcccagggccagagcatcgtccgcagcaagtcagcctccctgctc
aacgaccagcccttccaggtctactccggttcctcagcttcctcctccgacctgctctcc
agctcttccaagccccccgtcagcaccggccgctaccccgtcccctctggcatggccatg
ggcccgccgccccagtacaatgtccagtactccagcagcaccatgcccaaagacggcctg
tggacccagaggacccccatcctccccgaccagggcttccttcctccgccccagcattct
ctggccaacaccaactactccaaccgcaaccaggctcctccctacctcctccaggcccag
cagagaggcccgcccacggggcccgcgcccggtgatatgtgggctaaggagagacacctg
ccactcggaggtcagccacggagcggcacccttcagaggcaaagcagcagtagttcctcc
atgggggacccccggcgcatgcaggtgcccgagggagagtacatgacgtacagggacatc
cacaccctgggccgggggccgctggccgtggctcaggccatgcagaggcctctgtcggcc
cgtacctacagcattgacgggcccagcaccccaaggccccagagctccaggccacagccc
cacgagctgcccgagaggaccatgtcagtcagcgatttcaactaccagcacgtcagcccc
agcaagaggcccaacgccagggtgaagtccgagcactctttgctggatgggccgggagga
ccgggagcaggaggaagggtaccggtggactggagagatcaggtgatgcgccacatcgag
gccaagaagatggaaaagaacgccttgtctcggtcctataattccaattacgccccactg
agctgctcctactacggcagctctcgggacgtgcaccactcaggcagccaaggctctctg
gtctttagtgctgccgcagacggacggccttatggagcccagggccactgtgatgacgtg
tttggacctcaagggcagcagggctacaccatggacaccctccgacaagtgccttcgttg
aacggtcagctgggcggtccggtgcgtggccagatgacgtcgtgccagacgcctatggcc
cgccacccctccagagagcagctcatcgactacctgatgctcaaggtctcccatggccag
cagccccaggggccccctccaccacgggccgaccacgacacactgcagcaggagttccgg
gtcaaagtggagaagaacccagagctcgggttcagtatatcaggaggagtaggaggacgg
ggaaacccttttcgcccagacgataatggcatctttgtgacaagggtccagcctgaggga
cctgcctccaagatactccagcctggagacaagatcctccaggcaaacggatatagcttt
gtgaacgttgaccatgggaatgccgtggccctgctgaagacatttcccaccactgtggat
atgatcatcatccgagagttggcggcatag
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