Oncorhynchus tshawytscha (Chinook salmon): 112230803
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Entry
112230803 CDS
T05605
Name
(RefSeq) synaptic vesicle glycoprotein 2C-like
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112230803
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112230803
Transporters [BR:
otw02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
112230803
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LD_SV2
MFS_1
Sugar_tr
Pentapeptide_4
MFS_2
Pentapeptide_3
Pentapeptide
DUF6077
Motif
Other DBs
NCBI-GeneID:
112230803
NCBI-ProteinID:
XP_042167320
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All DBs
Position
LG33:6734440..6810449
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AA seq
740 aa
AA seq
DB search
MDESYNNRTSLVKGAKDIAKEAKRHAAKKVSKVVNRAADEYSSQRNYSQFQNEDDDDDDG
RYAYTQPDGNDHFPGGLTAKDEDEEDYASDATEGHDDEDEIYEGEYQGVPADGKPRDGHD
SLGQLVSDSMRDRKDLEQERQADEEELAQQYELIMQECGHGRFQWQLFFVLGMALMSDGV
EVFVVGFVLPSAELDMCVPNSGAGWLGSIVYLGMMMGAFFWGGLSDKVGRKQCLLIAMSV
NGFFSFLSSFVQGYGMFLFCRMLSGFGIGGAVPIVFPYFAEFLAREKRGEHLSWLCMFWM
IGGIYASAMAWLIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVCAVVALTFIPESPRFF
LEMGKHDEAWMVLKQIHDTNMRARGEPEKVFTVNKIKLPKHLDELVEMQSDSANPVAKVL
FRIRTELRGIWLTFMKCFNYPVRDNTIKLAIVWFTLSFGYYGLSVWFPDVIHHLQSDEYA
SRVKTHNNEHIEDFTFNFTLENQIHTNGVFVNDRFISMKLKSVTFIDSTFQNCYFDDVST
VGSLFKNCSFVEAFFYNTDIDDSKLVGSRVINSSFHHNKTGCQMTFDDDYSAYWVYFVNF
LGTLAVLPGNIVSALLMDKIGRLSMLGGSMVLSGISCFFLWFGTSESMMIFMLCLYNGLS
ISAWNSLDVVTAELYPTDRRGTGFGFCNAMCKLAAVLGNLIFGSLVGITKAIPILLASTV
LVGGGLVGLRLPDTRGNVLM
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtcgtacaacaacaggacgtcactggtgaagggcgccaaggacattgccaag
gaggccaaacgccatgccgctaagaaggtcagcaaggttgtcaaccgcgccgcagacgag
tactcctcccaacgcaactacagccagttccagaacgaggacgacgacgatgatgacgga
cgctacgcctacacacagcccgacggcaacgaccacttccccggtggtcttaccgccaaa
gacgaagacgaggaagactatgccagtgacgccacggagggtcacgatgatgaagatgag
atctatgagggggagtatcagggggtgcctgctgacgggaagcctagagacgggcatgat
tctttgggtcaacttgtctcagacagcatgagggaccgtaaggacctggagcaagagagg
caggcggacgaggaggagctggcccagcagtatgagctgatcatgcaggagtgtggccac
ggcaggtttcagtggcagctgttcttcgtgctgggcatggcgctgatgtctgatggagtg
gaagtgttcgtggtggggttcgtcctgcccagcgccgagctggacatgtgtgtccccaac
tctggagcagggtggctaggcagtatagtgtacctggggatgatgatgggggcattcttc
tgggggggtctgtcggacaaggtgggccgtaaacagtgtctgcttatcgctatgtcggtc
aacggcttcttctccttcctctcctccttcgtccaggggtacggcatgttcctcttctgc
cgcatgctctccggattcgggattggtggggctgtgcccatcgtgttcccctactttgct
gagttcctggcgagggagaagagaggagagcacctgagctggctctgcatgttctggatg
ataggagggatctacgcctcagccatggcctggctcatcataccacactacggttggagt
ttcagtatgggctcggcttaccagttccacagttggagagtgtttgtggtggtgtgtgct
ctgccctgtgtgtgtgctgtcgtagcactcaccttcatacctgagagcccacgatttttc
ctagagatgggtaaacatgacgaggcctggatggtgctgaaacagatccacgacaccaac
atgagggcccgcggagaaccagagaaagtctttactgtgaacaagataaagcttcctaag
catctggatgagttggtggagatgcagtcagactcagccaaccctgtggccaaagtcctc
ttcaggatcaggaccgaactcagagggatctggttaacgttcatgaaatgtttcaactac
ccggtcagagacaacaccatcaaactggccatcgtgtggtttacattgtcttttgggtac
tacggcctatcagtgtggttccctgatgtcatccatcaccttcagtctgatgagtacgcc
tccagagtgaagactcacaacaacgaacatatagaagacttcacctttaacttcaccctg
gagaaccagatacacaccaacggagtgttcgtcaacgacaggttcatcagcatgaagttg
aagtccgtcaccttcatagactccacatttcagaactgttactttgatgacgtgtcaaca
gtaggctcattattcaagaactgcagcttcgtagaagccttcttttataacacagatatt
gacgattctaagctggttgggtcgagggtaatcaacagttcatttcatcacaacaaaacg
ggctgtcagatgactttcgatgacgactacagcgcctactgggtctactttgtcaacttc
ctggggacgctcgccgtgttgcccggcaacatagtctccgccctcctcatggataagata
gggcgcctgagcatgctggggggctccatggtgctgtcaggcatcagttgtttcttcctg
tggtttggtaccagtgagtctatgatgatcttcatgctgtgtctctataacggcctcagt
atatcagcctggaactccctggatgtagtcactgctgagctttaccctacagacaggagg
ggtacaggctttggcttctgtaatgccatgtgtaagctggcagctgtgctggggaacctg
atcttcggctctctggttggcatcactaaggccatccccatcctgctggcgtcgactgta
ctggtgggaggaggactggtggggctacggctgcctgacacacgcggcaatgtcctgatg
tag
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