Oncorhynchus tshawytscha (Chinook salmon): 112230838
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Entry
112230838 CDS
T05605
Name
(RefSeq) ras-related protein rab7
KO
K07897
Ras-related protein Rab-7A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
otw04140
Autophagy - animal
otw04144
Endocytosis
otw04145
Phagosome
otw04148
Efferocytosis
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112230838
04145 Phagosome
112230838
04140 Autophagy - animal
112230838
04137 Mitophagy - animal
112230838
04148 Efferocytosis
112230838
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112230838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112230838
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112230838
04031 GTP-binding proteins [BR:
otw04031
]
112230838
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
112230838
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112230838
Exosomal proteins of other body fluids (saliva and urine)
112230838
Exosomal proteins of colorectal cancer cells
112230838
Exosomal proteins of bladder cancer cells
112230838
GTP-binding proteins [BR:
otw04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
112230838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
cobW
PduV-EutP
ATP_bind_1
nSTAND3
Septin
AAA_16
NTPase_1
AAA_22
AAA_7
DUF5992
AAA_24
G-alpha
AAA_5
SRPRB
ATPase_2
NACHT
NB-ARC
AAA_14
ABC_tran
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
112230838
NCBI-ProteinID:
XP_024252942
LinkDB
All DBs
Position
LG33:complement(8540618..8550164)
Genome browser
AA seq
205 aa
AA seq
DB search
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF
VVLGNKIDLENRQVTTKRAQAWCASKSSIPYFETSAKEAINVDQAFQTIARNALKQESEV
ETYDFPDQIKLRDDRPADPSDGCSC
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccgtaagaaggtgctgctgaaggtgatcatcctcggagactctggggtaggg
aagacttctctgatgaaccagtatgtaaataagaagttcagtaaccagtacaaggccact
ataggagcggacttcctcaccaaggaggtgatggtggacgacaggctggtcaccatgcag
atctgggacacggccgggcaggagcggttccagtctctgggcgtggcgttctaccgcggc
gctgactgctgtgtgctggtttacgatgtcacggcgcccaacaccttcaagacactggac
agctggagggatgagttcctgatccaggccagccccagagacccagacaacttccccttt
gtggtgctaggcaacaagattgacctcgagaacagacaggtgacgacaaaacgtgcccag
gcctggtgtgccagtaagagcagcatcccctactttgagaccagcgccaaggaggccatc
aacgtagaccaagcattccagaccattgcccgcaatgcccttaaacaggagtctgaggtg
gagacgtatgacttcccagaccagatcaaactgagagacgaccggcccgccgaccccagc
gacggctgctcctgctga
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