Oncorhynchus tshawytscha (Chinook salmon): 112230847
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Entry
112230847 CDS
T05605
Name
(RefSeq) myocyte-specific enhancer factor 2C-like isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112230847
04371 Apelin signaling pathway
112230847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112230847
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
112230847
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
112230847
NCBI-ProteinID:
XP_042167005
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Position
LG33:complement(8911872..8947885)
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AA seq
478 aa
AA seq
DB search
MGRKKIQIARIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGFDSPDIEADDSAGQSPESEDKYRKI
NDDIDLMISRQRLCQALPPSNYDMVGSIQGQNNSGLLYSQPGVGGSLGNHNLPPLSHTHP
GLQRNSMSPGPQHTHRPPSAGNAGGMMVSELSNVISNTGNGSYGNHRHSPGLLSPGCVAK
GMQAKTPPLMTSMTLSGNRKPDLRTLLPPGNKNNMPSVNQRINHSQSAQSLATPVVSIAT
PTLPGQGMGGYPSALSTSYGTEYSLGDLSSLSGFGGNGSGSVHMGSVTGWQQQQLQNMQH
SALGHMGNLCQNSNLNLQNVHQNLHIKSEPASPPRDRGIGFVSGGMGAVPQGYLTNQGPA
EAGRSPGDSLSSCGSSYDGSDREDHRGNDNFLLRPMSNQDERHSPSVKRMRLSEGWAT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagatccagatagcacggattatggatgaacgtaacagacaggtgacg
ttcaccaagaggaagtttggcctgatgaagaaggcgtacgagctgagcgtgctgtgtgac
tgtgagatcgccctcatcatcttcaacagcaccaacaagctgttccagtacgccagcacc
gacatggacaaggtgctgctcaagtacaccgagtacaacgagcctcacgagagcaggacc
aactctgacatcgtggagaccctacgaaagaagggtctaaatggctttgacagtcccgac
atcgaggcagacgactctgctggtcagagccccgagtcagaggataaataccgcaagatc
aacgacgatatcgacctcatgatcagcagacagagactctgtcaggctctccccccctct
aactacgacatggttggctccatccagggccaaaataacagcggactactctactctcaa
cctggggtggggggttccttaggaaaccacaatctgccgcccctctcgcacacacacccc
gggctgcagaggaacagcatgtcgcctggaccccaacacacacaccgaccccccagcgct
ggaaacgcaggagggatgatggtctcggagctgtctaacgtcatctctaacactggtaat
ggtagctatggtaaccaccgtcactctccggggctgctgtctccgggatgtgtggccaaa
ggcatgcaggccaagactccgcccctgatgacctccatgaccctgagtggtaaccgcaag
ccagacctccgcacgctgctgccccctggcaacaaaaacaacatgccctcagttaaccag
agaataaatcactcccagtctgcccagtctttggctactcctgtggtctccatagcaaca
cctactctgcccgggcagggtatgggagggtacccctctgccctctctacctcctatggc
acagagtactctctgggtgacctgagctctctgtcaggcttcggagggaacggctctgga
tcagttcacatgggatcagtaacaggctggcagcaacaacagctacagaacatgcagcac
tcagcactaggacacatgggaaacctttgtcagaactccaacctcaacctccagaatgtc
catcagaaccttcacatcaagtcagagcccgcctccccgcccagagatcgaggcatcgga
tttgtcagcggagggatgggggccgtgccccagggctacctaacaaatcaaggcccagcc
gaggcagggcgttctcctggcgacagcctatccagctgtgggagctcatacgacggcagc
gaccgcgaggatcaccgcggaaacgacaacttcctgctgcgcccgatgtccaatcaggat
gaacgccacagcccatccgtcaaacgcatgcgcctatcagaaggctgggctacatga
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