Oncorhynchus tshawytscha (Chinook salmon): 112230908
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Entry
112230908 CDS
T05605
Symbol
arhgef28a
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112230908 (arhgef28a)
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112230908 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
PH_13
C1_2
PHD_2
PHD
Motif
Other DBs
NCBI-GeneID:
112230908
NCBI-ProteinID:
XP_024253043
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All DBs
Position
LG33:complement(16484634..16591597)
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AA seq
1769 aa
AA seq
DB search
MELNRGEVPLYGQLEVCALLQVPDLEPEQTEFYVVLEGSRLVHVTVGKRTEDGKSLCFTV
PGHDLQETVSVTAYCHTEGRAKPCGGGASLDYVSDLPQEVAEYLLANSDCLSPQSHLEVL
RRVSAAPGEGNKEGDSSAGSGENYLGKTDQEDGYGGGRPRPDPEVECRLREMDERITQAM
ANLDYPLEWSGKASQPREEHQSRDTLLHLSVRLGLLSLSRFLIGQPRGQRALTLPNEEGA
TPLQLAQNGGDHTLFMALTTPPVPVGVCTVWADRTSVLRVCPGSGTLNLTFLGGPESSVM
DNILVLREKLTDHNILRQISALRGDVDVQMEDSGRADVHTSDTSDGGLGRGLPVEDLTLV
VRVFEEQLVLSLDDDEELPTLQTVKSQTAHPRRTQRQFSHSAVADKSASIINGRSQLSTE
VDDLKVSVAGVMTDSSVTDSRVWDTVDSEVLLQQATVTPPPLPPYGLEEQQSPFVSSSPL
SSPADRALARLNSLSHSYLTNQRGSPPLESPNLSPSLVALVIDSEEEGVLEKSPFSPLTF
DPRSSGDATAPDLTCTRTHSASSAGDPTPTKDMGDQKIRHRSYSYSSPKISLLPSRFSRD
TSAQPATSDLSPERREFSLSKQPQEKRELKFRKRAQSADDEGSVELAESLQHLTLSEFLK
EIEEEEWDKYNIPSKVASEKYKVIRTFSFLKSRMSSTRNKNKGKEKEREKEERDKDRQQN
GHRFSTGSCAGPTVCLVCDKPATGKELLHCSSCTLMVHKGCNDFAPPCLKKLVKNRTTSL
PQMRDSPSSCLIATSASLPMMSQRDRRETASLPNPLSSSVPSSTDSRLSESPEVVSDRRW
SPGRSEELLQTTESSSSTDSSLGEDCVDTGLHSDLAADALDYEAESWSLTVEHKFCKKQD
KRVVKRQDVIYELMQTEMHHLQTLCIMAEVFRRGMREEVQLDAGAVGRVFPCLDELLLLH
HDLFNSMRERRHSSAQPYGNRNYVIERIGDVLLHQFSEENAERMKQVYGDFCSHHTEAVT
FFKELQQHNKRFQTFIKQQSNNYLVRRREIPECILLVTQRITKYPVLLERILQYTQEDSE
EHRDLSRALVLIKEVIAAVDLRVSEFEQGQRLQDVLNRMDNRSAAKLKNGHTFRKQDVLV
PGRTLKHQGLLLWKTATGRLKDVLALLLTDTLIFLQEKDQKFIFAAVDQKPPVISLQKLI
VREVANEERGMFLISASAAGPEMYEVHTSSKDERNTWMRHIREAVESCPEDEEENTSESE
EERRASEARAQKIQRLQENLSSQDHQICSTLEEKLQIYADLSALRGGTQEQHPEPRLLVQ
PHPEEVPRAAVLLTAALREAENLRTTLSSRTCSPSSLCSSHRDPLSHPVSSANPPTPMDN
PTDGEASPRDPDTRDGEWSASQGLVLQSLTQPHTGDTNNINLKVAQSVQSLTQLLYSLQA
AVTIQDSFYEVQKLLLRESDRSGPCPPRPHPPCLQEQEKHRNQEKRREEVAAAVRLQGQL
RQERQRWERECQLRHSQQGELESRLEERERQCHLEAERLKQEWEELEEQLGEYQHSLERL
KEGQRSVGKERERLETQQKLLQSWRHSRQRSLPVMVIPLDGHQDSLPGQSGVHLDNAGSV
FVNEAAFTTSKVLNNRHMHHHIQQHQRGGTLRYGDDPRAHNSLNTILARSSQRHTLHPDT
NTPQCWAGGAGVTGYLYTTSGGQGTEHTPNDINTHSYVRETWSSTATVAGQYQGAPHHGD
HQLVLSSLVPLETESGDGEEGGEENIVYL
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaacagaggagaagtgcctctatatggccaattggaagtgtgtgctcttctg
caggttccagatctagaaccagaacagacagagttctatgtggttttagaaggttccaga
ctagtccatgttactgtagggaagagaacagaggatggaaagtctctgtgcttcactgtt
ccaggtcatgaccttcaggagactgtctctgtcacagcttattgtcacacagagggcaga
gccaagccctgtggaggcggggcctcgctggactacgtcagtgatttgccacaggaagtg
gctgagtacctgctagccaatagcgactgtctgagtccccagagccacctggaggtcctg
aggagggtttcagcagctccaggggaggggaacaaggagggtgacagtagtgctggctca
ggagagaactatctggggaagacagaccaggaggatgggtatgggggtgggagacccaga
cctgatccagaggtggagtgtcgtctcagggagatggacgagaggataacccaggccatg
gctaacctggactaccctctggagtggagcggcaaggccagccaacctagagaagagcac
cagtccagggacactctcctccacctctccgtgcgtctgggtttgctcagtctctcccgc
ttcctgattggccagcccaggggtcagagggcactgaccctgccaaatgaggaaggggcc
acaccactccagctggctcagaacggaggagaccacaccctctttatggcgcttaccacc
ccccctgtacctgtcggggtgtgcactgtgtgggcagataggacttctgttctaagggta
tgtcctgggtctggcacccttaaccttaccttcctggggggccctgagagcagtgttatg
gacaacatcctggttctccgagagaaactgacggaccacaatatcctcagacagatctca
gcactgagaggtgatgttgatgttcagatggaggacagtggcagagcggatgtccataca
agtgataccagtgatggaggtctaggcagggggctgccagtagaagaccttacactggtg
gttagagtttttgaagagcagcttgtactctctctggatgatgatgaggaacttccaaca
ttacaaacagtgaagtcccagacggcccaccccagacgaacccagagacagttctcccac
tctgctgtggcagacaaatcagcttccatcatcaatggcaggagtcagctctccacagag
gtggatgacctcaaggttagtgttgccggggtaatgacggacagctctgtgactgacagc
agggtgtgggacacagtggactcagaggtcctcctccaacaggccaccgtcacccctcca
cccttacctccctacggactagaggagcaacagtcccccttcgtctcttcttctcccttg
tcctcccctgctgaccgagccctcgcccgactgaacagcctttcccactcatacctaacc
aatcagagagggagcccacctctggagtcacctaacctcagccccagtctggtagctcta
gtgattgacagtgaggaggagggggttctggagaagtctcccttctctcctcttactttt
gaccctcgtagcagcggggacgccaccgccccagacctcacctgcacacgcacacactct
gcctcctcagccggtgaccccacccccacaaaggatatgggcgaccagaagatcagacac
cgctcctactcctactcctcccccaagatcagcctgctgccctcccgcttctcacgtgac
acctcagcccagcctgcgacatctgacctcagcccagaacggagagagttcagcctatca
aagcaacctcaagaaaaaagggagttaaagttccgtaagcgtgcccagtctgcagacgac
gagggcagcgttgagctggcagagtccctccaacacctcaccctctcagagttcctcaaa
gaaattgaagaagaggagtgggacaagtacaacatcccttccaaggtggcgtcagagaaa
tacaaagtgattcgtaccttcagcttcctcaagagccggatgtcgagcacacgcaacaag
aacaaggggaaggagaaggaaagggagaaggaggagagagacaaggacaggcagcagaat
ggacatcgcttctccacggggtcctgtgctggacccacggtctgtctggtctgtgacaaa
cctgctactggcaaggaacttctgcactgctccagttgtacactcatggtccataaaggt
tgtaatgactttgctcccccgtgtctaaagaaacttgtgaagaaccgaacgacatccctc
ccgcagatgcgagacagtccctcttcatgtctgatcgccacctcagcctctctacctatg
atgagccagagggacaggagggaaacagcctccctccccaatcccctctccagtagtgtc
ccctcttccactgacagcaggcttagtgagagtccggaagtggtgtctgacaggagatgg
agtcctggccgttcagaggagctcctacagaccacggagtcatcctcctccactgactcc
tccctcggagaagactgtgtggacactggtctccacagcgacctggctgctgatgctctg
gactacgaggctgagtcttggagtctgacagtggaacacaagttttgtaagaagcaggac
aaacgggtggtcaagagacaggacgtcatctatgagttgatgcagacagagatgcaccac
ctccagactctgtgcatcatggctgaggtcttccggcgagggatgagggaggaggtccag
ctggacgcgggcgccgtggggcgtgtcttcccctgtttggacgaactcctcctcctccac
cacgacctcttcaactccatgagggaacgccgccacagctccgcccagccatatgggaac
aggaactacgtcatagaacgcatcggagacgttctgctgcatcagttttctgaagagaac
gcagagaggatgaaacaggtgtatggagacttttgcagccatcacactgaggcagtcacc
ttcttcaaagagctacagcaacacaacaaacgatttcagaccttcatcaagcaacaaagt
aataactatttggtgcggaggagagagatcccagaatgcatcttgttggtgacccagagg
ataactaagtaccctgttctgttggagaggattctacagtacacccaggaggacagtgag
gagcacagggacctctccagagctctggttttgatcaaggaggtgatcgcggctgtagac
ctgagggtcagtgagtttgagcagggtcagaggttacaggacgtcctaaaccggatggac
aaccgtagtgctgccaagctgaagaacggacacacctttaggaagcaggatgttctggtg
ccaggcaggaccctcaaacaccagggcctgttactgtggaagaccgccaccggacgactc
aaagatgtcctggctctccttctcaccgacacactgatcttcctacaggagaaagaccag
aagttcatattcgctgctgtggaccagaagcccccagtgatctctctgcagaagctgatt
gtcagggaggtagccaatgaggagagagggatgtttctgatcagtgcatcggccgcgggt
ccagagatgtacgaggtccacacctcctcgaaagacgaacgcaacacatggatgagacac
atccgagaggctgtggagagctgtccagaggatgaggaggagaacactagcgaatcagag
gaggagagaagagcatctgaagccagagcccagaagatacaaagactacaggagaacctg
tccagtcaggaccatcagatatgttctactctggaggagaagctacagatctatgctgat
ctgtctgccctgaggggcggcacccaggaacagcaccctgagccacgcttactggtccag
ccacacccagaggaggtgccccgggctgcagtactgctcactgccgcgctccgagaggct
gagaacctgaggaccactctgtcctccaggacctgttctccctccagcctctgcagctct
cacagggaccccctgtcccaccctgtgtcctcagccaaccctcctacccccatggacaac
cccacagacggcgaagcctcacctagggaccctgataccagggacggggagtggtcagcc
tcccagggcctcgtactacagtccctgactcaaccccacaccggggacactaataatatc
aaccttaaggtggctcagagtgtccagagcttgacccagttactctacagtctgcaggca
gcggtaaccatccaagacagtttctacgaggtacagaagctcctcctccgtgaaagtgac
cgttctggcccctgcccgccgagaccacaccccccgtgtctccaggagcaggagaagcat
cgtaaccaggagaagcgccgtgaggaggtggcggcggcggtgcggttacagggtcagctg
cgccaggagaggcagcggtgggagagggagtgccagctgcgccacagccaacagggggag
ctggagagcaggctagaggagagggagagacagtgtcacctggaggctgaaaggctgaag
caggagtgggaagagctcgaagagcagctgggggagtaccagcatagcctggagaggctg
aaggagggccagagaagcgtggggaaggagagggagaggctggagacccagcagaagctg
ctgcagagctggagacacagccgacagaggagcctgcctgtcatggtcataccgctggat
ggtcatcaggactcacttcctggtcagtccggcgtccatcttgacaacgccggctcagtg
tttgtcaacgaggcagcgttcaccacgtcgaaggtgcttaataaccgccacatgcaccac
cacatacagcagcaccagagaggtgggaccctgaggtacggagatgaccctcgagcccac
aacagcctgaacaccatactggcccgctccagccagagacacacgctccaccctgacaca
aacacaccccagtgctgggcggggggtgccggtgtcactgggtacctctacacaacctca
ggtggacaggggacagagcacacacccaacgatataaacacacacagctatgtgagggag
acgtggtcctcgacggcaactgtggctggacagtatcagggtgcacctcaccatggcgac
caccaactggtcctctcctccttggtccccctggagacggagagtggggatggggaggag
gggggagaggagaacattgtgtacctctga
DBGET
integrated database retrieval system
