Oncorhynchus tshawytscha (Chinook salmon): 112230929
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Entry
112230929 CDS
T05605
Name
(RefSeq) tRNA pseudouridine synthase A isoform X2
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112230929
Enzymes [BR:
otw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
112230929
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112230929
Prokaryotic type
112230929
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
112230929
NCBI-ProteinID:
XP_024253100
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All DBs
Position
LG33:19054611..19057878
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AA seq
441 aa
AA seq
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MQPKSWTRSAKQIPKKKKKKKKKKKKKKESSLPESHTKKKGWLYKCAGIRWIMSKESGNV
QNKPVKRVEEGNGESGEHIRKKLKSDVEQTGDERKHPKRKVVLLLAYSGKGYYGMQRNAG
SSQFKTIEDELVTALIKSGCIPDNHGDDMKKMSFQRCARTDKGVSAAGQVVSLKLWMIED
IKEKLNSNLPPQIRVLGLKRVTGGFNSKNSCDARTYSYMLPTVAFAPKDYSTENSIAFRL
EPETLQRVNCLFGSYKGTHNFHNFTSQKAARDPSARRYITEMTCGEPFVRGGAEFAEITV
RGQSFMMHQIRKMIGLVIAVVKGYSGDEVLKRSWGEEKVDVPKAPGLGLVLEKVHFDRYN
KRFGGDGLHECLEWTEEEQAILAFKEEHIYPSIVETECQEGSMASWMATLPIHDFKATAK
GAQDKDRGQDDDEGNGSDSAL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctaaaagttggacgcgatctgccaaacaaatcccaaagaagaagaagaagaag
aagaagaagaagaagaagaagaaggagtccagtttgcccgaaagccacacgaagaagaaa
ggttggctttacaagtgtgcagggataaggtggataatgagtaaagagtcagggaatgtg
cagaacaagccagtgaaacgagtggaggagggaaatggagagtcgggtgagcacatcaga
aagaagcttaagtctgatgtagaacagactggcgatgagaggaaacaccccaaaagaaaa
gtggtcctgcttttggcgtattcaggcaaaggttactacggtatgcagagaaatgctgga
tcttcccagttcaaaaccattgaggatgagctggttacagcactgattaagtctgggtgc
atcccagacaaccatggagatgatatgaaaaaaatgtcattccaaagatgtgcaagaacg
gacaagggtgtttctgcagcaggtcaagtggtctctctaaaactatggatgattgaagac
ataaaggaaaagctcaactccaatcttccaccacagatccgagtgctgggtctgaaacga
gtgactgggggcttcaattctaaaaacagctgtgatgcccgcacgtactcctacatgctc
cccactgtggccttcgccccaaaagactatagcactgagaattctattgcattccgcctg
gagccagagacactgcagagagtaaattgtctgtttggcagctacaagggcactcataac
tttcacaacttcacctcccagaaggccgcgcgggaccccagcgcccgccgttacatcaca
gagatgacctgtggcgagccctttgtgcgcggcggcgctgagtttgctgagattaccgtg
cgtggccagagcttcatgatgcatcaaatccggaaaatgattggcctggtgatagctgtg
gtgaagggttattctggggatgaggtgttaaagcgaagctggggcgaggagaaggttgat
gtacccaaggcccctgggctgggcctggtgctcgagaaggtgcactttgacaggtacaac
aagcgcttcggtggggacggcctccatgagtgcctggagtggactgaagaggagcaggct
atcttggccttcaaggaggaacacatctaccccagcattgtggagactgagtgccaggaa
gggtccatggccagctggatggccacactgcccatacacgactttaaggccactgcaaaa
ggggctcaggataaggacagggggcaggatgatgatgagggtaatggttcagattctgca
ctttga
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