Oncorhynchus tshawytscha (Chinook salmon): 112230939
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Entry
112230939 CDS
T05605
Name
(RefSeq) syntaxin-2
KO
K08486
syntaxin 1B/2/3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112230939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112230939
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112230939
Membrane trafficking [BR:
otw04131
]
SNARE
Syntaxin (Qa)
Stx-PM
112230939
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
112230939
Exosomal proteins of other body fluids (saliva and urine)
112230939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
COG6_N
T2SSF
Med28
RACo_linker
TMPIT
COG3_N
DUF16
Prominin
EcoEI_R_C
Motif
Other DBs
NCBI-GeneID:
112230939
NCBI-ProteinID:
XP_024253120
UniProt:
A0AAZ3QQL2
LinkDB
All DBs
Position
LG33:19906178..19912740
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AA seq
302 aa
AA seq
DB search
MRDRLGDLTANSNNNPFNVDDDDDGTITVDNNSHRDDFLKQVGEVRRLIDKISSQVDEVV
KKHSAILSAPNPEESTKDELEQLTNEIKRNANTVRAKLKTIQDSLPEDENANTASVDQRI
QTNQHTNLMRWFVDVMTVYNETQMSFRERCKGRIQRQMEITGKVTTDEELEEILHSENPA
IFTSDIISDSQITRQALNEIESRHKDIIRLESSIRELHEMFVDMAMLVETQGEMINNIEK
NVSSAAEYVGVAKVETKKAVRYQKAARRKYVIIAIVVVILLAVIALIVGLSLGLKLPSTA
QP
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgagggaccgcctgggcgacttgacagcgaacagcaacaataacccttttaatgtggat
gatgatgatgatggcaccatcacagtggataacaattcccacagggatgacttcttgaaa
caggtgggggaggtgcgacgcctcatcgataagatctcttcccaggtagatgaagtggtg
aagaaacacagcgccatcctctctgcccccaaccctgaggagagcaccaaagatgaactg
gagcagctcaccaatgaaatcaagaggaatgccaacacagtgcgggccaagttaaaaacc
atacaggacagcctgcctgaagatgagaatgcaaacacagcctctgtggaccagcgcatc
cagacaaaccagcacacaaatctgatgcgctggtttgtggatgtcatgacggtgtacaac
gagacccagatgtccttcagggagaggtgcaaaggacggattcagagacagatggagatc
actgggaaagtgaccactgatgaggagctggaggagattctgcacagtgaaaatcctgcc
atcttcacttctgatatcatctccgactcccagatcacgcgccaggctctgaatgagatc
gagtctcgccataaggacatcatccgcctggagtccagcatcagggagctccacgagatg
tttgttgacatggccatgctggtggagactcagggggagatgatcaacaacatagagaag
aacgtgagcagtgcagcagagtacgtcggcgtggccaaagtggaaaccaagaaggcagtg
cggtaccagaaagcggcgcgcaggaagtatgtcataattgccatagtcgtggtgatcctg
cttgctgtaatcgcacttatcgttggtttgtctctgggtctaaaactgccctcaaccgca
cagccttag
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