Oncorhynchus tshawytscha (Chinook salmon): 112230943
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Entry
112230943 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: sphingomyelin phosphodiesterase 4
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00600
Sphingolipid metabolism
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
112230943
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
112230943
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GFIT
Motif
Pfam:
mit_SMPDase
OAF_N
Motif
Other DBs
NCBI-GeneID:
112230943
NCBI-ProteinID:
XP_042167335
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Position
LG33:20415096..20429968
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AA seq
830 aa
AA seq
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MAAPALQQPSFLLANLKVDSTTKPFLQRCQELVKVIDDYPAKELHLIFPWLVESVFGSLD
GVIMGWNLQFLQARSNEYNIVMDFLDPSGPMMKLVYKLQAEEYKYEIPVSFLPGPVKASI
QEGVLPDCPLFHNKLQFPLSGLQTLSLALNPFEYYMFIFASSLITPKNYPLGQHVSSLDN
AYFVLVDTYLKYFLPTEGSVPPSPFADNRGSVSPPAPRAPSVPFAGYGIHSTSLLKRHIS
HQPSVTADPAAQEIWRSEALLQVFVEIWLHHYSLEMYQKLQSPQVKLALLHYRLSMSSMP
CQPLTPPGSGTLDTYQVLLPFHPLPPGLLEETFTPTEEHVLVVRLLVKHLHAFSCSLKPE
QVCSSPSAHSSPLEEFKRVVVQRFVQQKLYVFLQHCFSHWPLDASFRAVLETWLSYIQPW
RYTGENTNPQTDQNKGVPEKWGLFVQENLLMYTKLFQGFLNRVVRIDLVNVKNALMVFRV
AKVFAQPNLSEMIQKGEQLFLEPEHVLHHRQHRVFLTPSHGGSFLSARQSVVTDGVFRVK
SHVYGLEGQDCQYKQMFGTELRGVVLKLIQIIAQARQTAKRISDHSAEVAANNSFMSWFG
MGSPDLNYTFNGGEVDDTGECVKKTHEFLERSLDYLCQIFRLNAGQLSQLMATLGSGQDD
GNSRQLPDCVQGENGLILTDLGRMQIINGLRRFEIEYQGDPELQPIRSYENAVLVRLFFK
ISSLVNERFGDHMEVLCSRPDFLGRLGRHYLASPEVMADGRQRSPETRRTAERNRRPRLS
LRTLASYRTLLMLLFLYLFGVLFSFGPISSTLLILTGGFLYGLFIXPVWR
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggctgccccagccttgcaacagcccagttttcttctggccaatctgaaagttgactcg
accaccaaaccttttctccagcggtgccaggagctggtgaaggtcattgatgactaccct
gcaaaggagctgcacctgatcttcccctggcttgtagagagtgtttttggcagtctggat
ggggtcatcatgggctggaacctgcaattcctgcaggcacgcagcaatgagtacaacatc
gtcatggactttctcgatcctagtgggccaatgatgaagcttgtgtacaagcttcaagca
gaggagtacaagtatgaaatacctgtcagctttctccctggtcctgtaaaggcatctata
caggaaggtgtcctcccagattgtccactttttcacaacaagctgcagtttcctctgtct
ggtctccagacactcagcctggcgctcaatccatttgaatattacatgttcatatttgct
tccagtcttatcacaccaaagaactaccctctgggccagcatgtgagcagcttggacaat
gcgtactttgtgcttgtggacacctacctcaagtacttcctccctacagagggcagcgtt
cctccctctccattcgccgacaatagaggctctgtgtctccacctgctcccagggctccc
agcgtgccttttgcagggtatggcatccacagcaccagcctcctcaagcgccacatatcc
catcaaccctcggtcactgctgaccctgcagcccaggagatctggaggtcagaggcatta
ctacaggtttttgtggagatctggctgcatcactactccctggagatgtaccagaagctg
cagtccccccaggtgaagctggcgctgctgcactatcgcctcagtatgtccagcatgccg
tgccaacccctgacccctcctggttctgggaccctcgacacgtaccaagtacttttacct
tttcatccactcccaccgggcctgctggaggagactttcaccccgacagaggagcacgtt
ctggtggtgcgtctcctggtgaagcacctccatgccttttcctgcagcctgaagcctgag
caggtctgctcctcgccctcggcccactccagccccctggaagagttcaagagggtggtg
gtgcagcgttttgtccagcagaagctctatgtgttcctccagcactgctttagtcactgg
cctttagatgcctccttcagagcggtgttggagacgtggcttagctacatccagccgtgg
aggtacacaggagagaataccaatcctcagacagaccagaacaaaggtgtacctgagaaa
tggggcttgtttgttcaggagaacctgctcatgtacacaaagctctttcagggctttctc
aacagggtggtacgcatagacctggtcaacgtcaaaaatgcactaatggtcttcagggtg
gccaaagtcttcgctcagccaaacctatcagagatgattcagaaaggagagcagctgttt
ctggagccggagcacgtcctccaccatcggcagcaccgggtcttcctcacgccaagccat
ggtggcagcttcctgtctgcccggcagtccgtggtgacagacggggttttcagggtgaag
agccacgtgtacggcctggagggccaggactgccagtacaaacagatgttcggcacagag
ctgaggggcgtggtcctgaagctcattcagatcatcgcccaggcgaggcagacagctaag
aggatatcagatcactcagctgaagtggcggccaataactccttcatgtcttggtttgga
atgggctcccccgacctcaactacaccttcaatggaggagaggtggatgacactggggaa
tgtgtcaagaagacccatgagttcctggagaggtcactggactacctctgtcagatattt
cgtctgaatgcagggcagctttctcagctgatggcaaccctgggctctggtcaggacgat
gggaactccaggcagctaccagactgtgttcagggtgagaatggactcatcctcacagac
ctgggccgaatgcagatcatcaatggactgcgtagatttgagattgagtaccaaggagac
ccagagcttcagcccatcaggagctatgagaatgccgtcctggtcagactgtttttcaag
atctcgtccctggtgaatgagaggttcggagatcacatggaagttctgtgctcgcggccg
gacttcctgggccggttgggacgacactacctggccagccccgaggtcatggcggacggc
aggcagaggagcccagagacacggcgaacagcggagaggaaccgacggccgaggctaagt
ctgcgcacactggcaagctacagaaccctgctgatgcttctatttctctacctgtttggg
gtgctgttctcattcgggcccatatccagcacactgctcatccttacaggcggctttctc
tatggactcttcatanaccctgtttggagataa
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