Oncorhynchus tshawytscha (Chinook salmon): 112230959
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Entry
112230959 CDS
T05605
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1-like
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112230959
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
112230959
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
112230959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
112230959
NCBI-ProteinID:
XP_024253164
LinkDB
All DBs
Position
LG33:complement(21301045..21312977)
Genome browser
AA seq
1086 aa
AA seq
DB search
MSYKQQGEGLGDAILEEHKASPASRNRQPNSTGGEGEGVPVRRSWRPCQMLGQDGQEHHH
HHHPPIPHQGSGRGPARHRRRTPSGQGPSRQWEGADMEPPRHTQPPRPGVARYRRQGEPR
VRVHRQRPPPRDGQDTHALPFQQRRSSGSPLTEQRDMTGPATMKQQHPPHSCPPHHTQNS
RAPDLTAGTSPTPTHHTPRPTAPDPPSQDLHQTLPNIESPQPQEEGYSSSIMQSVSTQSG
FDNQTDLENQREGGHGEGELKETGLGEEDRSKRDLVEDDQEDGTNEYCSDTESAASLSME
APSLSSPPHQSPFLPPPIQSENSDQCSDEFSPSPTYENDIMPDDENCTDSPLSHPKSFTF
RDSYPKTYAEFYNESYPQSESITESNTEPYAKSYPQSFPAPLKLINYPDRRSEADPDEPY
SEPHPGPCSRRQSEHVYKGATDTEPQPRDSWPGRDVGLPQTSPHWQGRSVGSRLHHYNDT
TSDGEDDSLKESPRSQSLGPPPWNVQGEAQSERPSSGQPGSGEFQDEQAGMELRPPAEGL
SEDSVTGSGDAISLAIRDIREAIEEVKTKTVRSPYTPDQPIEPVWVMRPEVSPNEDESSP
EQPPGGDPVSQSPSHYNPVPARVASPVHVPVPAPAPSRVPSRVPSRVPVPVPEHVCPVRV
ESSRTHQVQQREHREQRELPRPPSIEEIQRHMPSFPTYVEVPGPCDPEDLIDGIIFAACY
LGSTHLLSERTPTRSARMQQAQEAMSRVRTGGEIPSSTEVDLFMSTQRIKVLNADTQASM
MDLPLRTISYIADIGNMVVLMARGKMVRSRSAQEHLNHTTDHTNSPARDDLPQYRMVCHV
FESEDAQLIAQSIGQAFSVAYQEFLRANGIDPEDLSQREYSDLLNTQDMYNDDLIHFSKS
ENCRDVYIEKQKGEMLGVVIVESGWGSILPTVIIASMMHFGPAEKSGRLNIGDQIMTING
TSLVGLPLSTCQSIIKGLKAQSKIKLNIVRCPPVTMVLIRRPDLRYQLGFSVQNGIICSL
MRGGIAERGGVRVGHRIIDINGQSVVATPHEKIVQVLSNAVGEIHMKTMPAAMYRLLTAQ
EQPVYI
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgagctacaagcagcagggggaggggctaggtgatgctatcttggaggagcataaggct
tcacctgcttccagaaaccggcagcccaatagcacagggggagaaggagaaggggtccct
gtccggagaagttggagaccctgccaaatgctcggtcaggatgggcaggaacatcatcac
caccatcatcctcctattccgcaccaaggctcaggccgcggccctgcacggcaccgtaga
cgaactccctcagggcagggcccatccagacagtgggagggagcagacatggagcctcct
cgccacacccagccgcctcgccctggcgtggcccgctaccgccgccagggagagcccagg
gtcagagttcacagacagagaccgccgccgagagatggccaagacacccacgccctgccg
tttcaacagcgacggtcatctggctctcctctgactgaacagagggacatgactggtccc
gcaacaatgaagcagcagcaccccccacactcctgtccaccccaccacacacagaacagt
agagcacctgaccttactgctggtacctctcctacccccacacaccacacaccacgtcct
actgcccctgatcccccttcccaagacctgcatcaaacccttcccaacatagagtctccc
caaccacaggaggaagggtacagctcatccataatgcagtctgttagtactcaaagtgga
tttgacaaccagacagacctagagaaccagagggaggggggccatggagagggggagcta
aaagagaccggtctgggagaagaagacagaagcaagagggatctggtagaggatgatcag
gaagatggaactaatgagtactgttctgacactgagagtgctgcctcgctaagcatggag
gctccgtccctgagttcacctcctcaccaatcaccattcttgccccctccaattcagtct
gagaactcggaccaatgtagtgacgagtttagcccaagtcccacctatgaaaatgacata
atgcctgatgatgagaactgcactgattctccactgtcccaccccaaatccttcaccttc
agagactcgtatcctaagacctatgcggaattctataatgagtcctacccacagtcagaa
tctatcacagaatccaacacagagccctacgcaaaatcctaccctcagtctttccctgca
cccttgaaattgattaattatccagacaggagatctgaggctgaccctgatgagccatat
tcagaacctcacccagggccctgcagtcgtagacagagcgagcatgtttataagggagct
acagacactgaaccccaaccccgtgactcctggccaggtagggatgtggggttaccacag
accagcccccattggcagggacgctcagtcggctcaaggctacaccactacaatgacact
acgtctgatggggaggacgacagcctcaaagaaagccccagatcccaaagcctggggcca
cctccctggaatgtgcaaggtgaagcccagtcagagcggcccagctctgggcagcctggt
tcaggtgagttccaggatgagcaggctgggatggagctccgacctccagcggaaggcctt
tcagaggacagtgtcacaggctcaggggatgctatctctctggccatcagggacatccga
gaggccatagaggaggtgaagacaaagacagtgcgctcgccctacactcctgaccagccc
atagagcctgtgtgggtgatgagaccggaggtcagtcctaatgaggacgaatcctcccca
gagcagccaccaggtggcgaccctgtctctcagtctccttcacactataacccagtccca
gcccgagttgcttcccctgtccatgttccagtaccagctccagccccatcccgagttcca
tcccgagttccatcccgagttccggtgccagtcccagagcatgtctgtcctgtgagggta
gagtcctccagaacacaccaggttcagcagagggagcatagagaacagagggagctgcct
aggccaccatccattgaggagatccagaggcatatgccgtccttccctacatacgtggaa
gtcccagggccatgtgacccagaggacctgattgatggcatcatttttgcggcctgctac
ctgggctccacccacctgctgtcagagaggactcccactaggagtgcccgcatgcagcag
gcccaggaggctatgagccgtgtcaggactgggggtgagattccttcttccactgaagtg
gatctcttcatgtctacacagaggatcaaagtgctgaatgcagacactcaggcgtccatg
atggacctgccactgaggaccatctcctacatcgctgacataggcaatatggtggtgctg
atggccagggggaagatggtacgctccaggagcgctcaggaacatctgaaccatacaact
gaccacaccaacagccctgcccgcgacgacctcccccagtacaggatggtctgccacgtg
tttgagtcggaggatgcccagctcatagcccagtctattggccaggccttcagtgtggcg
taccaggagttcctgcgggccaatggcatcgacccagaggacctgagtcagagggagtac
agcgacctgctcaacactcaggacatgtacaacgatgacctcatccacttctccaagtca
gagaactgcagagatgtttacatagagaagcagaagggagagatgctgggcgtggtcata
gtggagtcaggctggggctctattctgcccaccgtcatcattgctagcatgatgcatttt
gggcctgcggagaagtctggtcgactcaacattggtgaccagatcatgaccatcaatgga
accagtctggttggactgcccctctccacttgccagagtatcatcaagggtctgaaggcc
cagtccaagattaagttgaacatcgtcaggtgtccccccgtcactatggtgctgatccgc
agaccagacctccgatatcagctgggcttcagcgtacagaatggcattatctgcagcctg
atgagggggggcattgctgagagaggaggggtccgtgtcggtcatcgcatcattgatatc
aacggtcagagtgtggtggctacacctcatgagaagattgttcaagtcctgtctaatgca
gtgggagagatccacatgaagacgatgcctgcagccatgtaccgtctattgactgcccag
gaacagccggtctacatctga
DBGET
integrated database retrieval system
