Oncorhynchus tshawytscha (Chinook salmon): 112230977
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Entry
112230977 CDS
T05605
Name
(RefSeq) PH and SEC7 domain-containing protein 4 isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112230977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112230977
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112230977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
112230977
NCBI-ProteinID:
XP_024253200
LinkDB
All DBs
Position
LG33:21711784..21729109
Genome browser
AA seq
1077 aa
AA seq
DB search
MEGSRVRSPLPDLREQDSQTWPNMDLPLQSRPLEEAIGWREMEEQVNQMDREEEDNSHQT
GRTEEPEEHWDSMTLPVYPMIHPSVSLSFATVQWDITNPSPDIPYPMTDNSSADELDSSG
AASLDWTVSPLSQQQHQACVTGINIELSVQEKTHNQNGPEQQLPLETDQGESSPRACDTP
RPYVEEHAAHTQEEEASAQELFEDHDSLSGRRPWPEEGIGPSVTEETITPSDIAPSSVET
GESETRPDSESLGSVPGEKQEQTGTVLTIQINPEQGSSSTDYEEEGEQTEQIGQSEGREQ
SDSEEESAMIELLEHLPEPAELKEQSELSEKSEHRGQSEPNHTEQSEYGNNNETTEQPED
SEKLVESDQVEHSNQSGDGDQQTEEAHLQQAEQSEVTDQSEQSKESEQTQQPEQTECLES
KQTQHSEQTMYSEQTDFSVQAEPQTEPSRETEHSEDSEQSKQSGEMEQSEQSEQTEQSEQ
TQQSEQTQQSEQTEKPIHSKQLEELLFLCTEELEQTEQSDQTEDQKHSGAEQPAQTALTE
STEELEQTEHVEQLEQNVCTEDSCLPPREGSGEQLESQVQQTEASEPVVVHMNGGGLDRE
RACRLAERLYRLDGIYKTDVVKHLDKDNDFSRAVGEEYLKFFDFTGQRLDQGLRSFLRVV
VLIGETQERERVLQHFSCRFQQCNPHTFSSSGEVLTLTCSVMLLNSDLHGQNVGKPMSVS
SFVSNLDGMNEGESFSKELLKALYNSIKNEPLEWAVDEKELKSSMLLAEDAKEDAPLRSK
SNPFQDVPHDKKATVFKQSFLKRKAHADIDGKRTPWGKRSWKIFYGVLKGMVLYLQKDEY
TMEWQSTEEVVSVHHALAEQAADYTKRPHVFRLQTADWRVFLFQASSTAEMISWISRINL
VSALHSSPPFPAAVGSQRKFCRPILPASQSAHTLERQLQSHAGMLESFQEDLAYLQQSLP
DGRRAKAKEMEEHRVREEYLQHEKCRYEAYIQMLEVWKGLNQSTETEVGTSELDLFDRAL
CKDTVDEEGEEGTLKKSHSSPSLDLEMASQPVVKVKRNISERRTYRKIIIPRRNQDI
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtctagggtgcgctctcctctcccagacctcagggagcaagacagccagaca
tggcccaatatggatctcccactacagagcaggccactggaggaggctattgggtggaga
gagatggaggagcaagtgaaccagatggacagggaggaagaggataactctcatcagact
ggaaggactgaggagccagaggagcactgggattccatgactttacctgtgtaccccatg
atccatcccagtgtctctctgtcctttgccacggtgcagtgggacataaccaacccctcc
cctgacattccctaccccatgactgacaacagctcggccgatgagctggactccagtgga
gcggccagtctggactggactgtgagtcccctgtcccagcagcaacatcaagcctgtgtg
acaggaatcaacatagagctgtctgtccaggagaagacacataatcagaacggaccggag
caacagctgcctttggagacagaccagggtgaaagctcccctcgggcatgtgatacacca
aggccatatgtggaggagcatgcagcacacacacaggaagaggaggcttcagcacaagag
ctatttgaggaccatgactctctttcagggagacgtccatggccagaggaagggatagga
ccgtctgtgacagaggagactatcacaccctctgacatagctcctagctctgtagagaca
ggagagtccgagactaggccggatagtgagagtttaggctctgtgccgggagagaaacag
gaacagactggcacagtcctgactatacagatcaacccagagcaaggatccagctctacg
gactatgaggaggagggggagcagacagaacagataggacagtcagaggggagggaacag
tcggacagtgaggaggaatcagcgatgatagaactcttagagcacctgcctgagccagct
gaactgaaagaacagtcagaactctcagagaagtctgaacaccgtgggcagtcagagcct
aatcacacagaacagagtgaatacgggaacaataacgagacaacagagcagccagaagac
tctgagaaacttgtagagtccgaccaggtagagcattcaaatcagtcaggggacggagac
cagcaaactgaagaggcccatttacaacaggcagaacagtcagaagtgacagaccagtca
gaacaatcaaaagaatcagagcagacgcaacagccagaacagacagaatgtttagaatca
aaacagacgcaacattctgagcaaactatgtactccgagcagacagacttttcagtgcag
gcagaaccacagacagaaccatcacgggagacggaacactctgaagattctgagcagtca
aaacaatcaggggagatggagcagtcggagcagtcagagcagacggagcagtcagagcag
acgcagcagtcagagcagacgcagcagtcagagcagacggaaaaaccaatacattcaaag
cagttagaagaattacttttcctttgcacagaggagcttgaacagacagaacagtcagac
cagacagaagaccagaaacactcaggggctgaacagccagcgcagactgcactgactgag
tcgacagaagagctagagcagacagagcatgtagaacaattggaacagaacgtttgtaca
gaggattcatgtttgccgcccagggaaggaagtggagagcaactggagtctcaggtacag
cagacggaggcctcagaaccagtggtggtccatatgaatggtggaggtttggacagggag
agggcctgcaggctggctgaaagactctacaggctggatgggatctacaagacagatgtg
gtcaaacacctggacaaagacaatgactttagccgagctgttggggaggagtacctgaag
ttctttgacttcaccggtcagagactggaccaaggcctgaggtctttcctgagggtggtg
gtgcttatcggtgagacccaggaaagagaacgggtgctgcagcatttctcctgtcgattc
cagcaatgcaaccctcacaccttctcctcttccggagaagtactcacactcacctgttct
gtgatgctcctgaactctgatctgcatggacagaatgtgggcaaacccatgtctgtgtcc
agcttcgtgtccaacctggatgggatgaatgagggtgagagcttcagtaaggagctgttg
aaggctctctacaactccattaagaacgagcctctggaatgggcagttgatgagaaggaa
ctgaagagctccatgttgttggcggaggatgctaaagaggacgcacccctgcgctccaag
agcaacccgttccaagatgtgccgcatgacaagaaggccacagtgttcaaacagagcttc
ctcaaacgcaaggcccacgctgacatcgatggcaaacgcactccttgggggaagagaagc
tggaagatcttctatggagtgctgaagggaatggtcctctacttgcagaaggatgagtat
acgatggagtggcagagtacagaggaggtggtcagtgtgcaccatgccctggcagagcag
gcagcagactacactaagagaccacacgtcttccgcctgcagaccgctgactggagggtt
ttcctctttcaggcctcctccacagcagagatgatttcatggatcagccgtatcaacctg
gtgtcagccctacactcctctcctcccttccctgctgctgtgggctctcagaggaagttc
tgcagacccatcctgccagcctcgcagtctgcacacacactggagagacagctgcagtcc
catgcaggcatgctggagtccttccaggaagacctggcctacctgcagcagagtctccct
gacgggcgcagggccaaagccaaggagatggaggaacaccgagtcagagaggaatacctg
cagcatgagaaatgtcgctacgaggcctacatccagatgctggaggtctggaagggtttg
aaccagtcaaccgagactgaggtgggaaccagtgagctcgacctgtttgacagagctctg
tgtaaggacacagtggatgaggagggggaggagggaaccctgaagaagtcccactccagc
ccctccctggatctggagatggcctcgcaacctgtggtcaaagttaaacgcaacatctcg
gagagacggacctatcgcaagatcatcataccgagacgcaaccaggacatatga
DBGET
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