Oncorhynchus tshawytscha (Chinook salmon): 112230998
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Entry
112230998 CDS
T05605
Symbol
dnm1a
Name
(RefSeq) dynamin-1a isoform X1
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
otw05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112230998 (dnm1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
112230998 (dnm1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112230998 (dnm1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112230998 (dnm1a)
Enzymes [BR:
otw01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
112230998 (dnm1a)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
112230998 (dnm1a)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
112230998 (dnm1a)
RhoA-dependent endocytosis
112230998 (dnm1a)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112230998 (dnm1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
PH
MMR_HSR1
DUF5130
Ldh_1_N
Motif
Other DBs
NCBI-GeneID:
112230998
NCBI-ProteinID:
XP_042166950
LinkDB
All DBs
Position
LG33:22644104..22749738
Genome browser
AA seq
863 aa
AA seq
DB search
MGNRGMEDLIPLVNKMQDAFSAIGQNSQLDLPQIAVVGGQSAGKSSVLENFVGKDFLPRG
SGIVTRRPLVLQLINCPTEYAEFLHCKGKKFTDFDEVRGEIEAETDRITGQNKGISPVPI
NLRVYSPHVLNLTLVDLPGMTKVPVGDQPADIEQQIRDMLYQFVTKDNCLLLAVSPANSD
LANSDALKIAKEVDPQGQRTIGVITKLDLMDEGTDAREILENKLLPLRRGYIGVVNRSQK
DIDGKKDITAAMAAERKFFLTHPGYRHLAERMGTPYLQKTLNQQLTNHIRDTLPGLRAKL
QSQLLSIEKEVEEYKNFRPDDPSRKTKALLQMVQQFSVDFEKRIEGSGDQIDTAELSGGA
KINRIFHERFPFELVKMEFNEKELRKEISYAIKNIHGIRTGLFTPDMAFETIVKRQIGKI
KEPCQKCVDMVISELVNTVRQCTQKLAQYPMLREEMDKIVTQHIRDRESRTKDQVMLLID
IELAYMNTNHEDFIGFANAQQRSSQVAQKKQPGNKQDEIMPERGAVNDRFKVIRKGWLTI
NNIGIMKGGAKEYWFVLTAESLSWYKDDEEKEKKYMLQVDNLRLRDVEKSFMSSKQIFAL
FNTEQRNVYKDYRQLELACETQDDIDGWKASFLRAGVYPERVTEKEGKQSESGDGENGSD
NFMHSIDPQLERQVETIRNLVDSYMAIVNKTIRDLMPKTIMYLMINNTKEFINAELLANL
YHSGDQNSLMEESQEQAHHRDEMLRMYHALREALNIIGDISTTTVTTAMPPPVDDSWLRP
GGNNSGGRSPASSPTPNRRAPPGPPGRPVSRGSAPGLPPGPPVPSRPGASPDPFGGPPPS
VPSRPNRAPPGVPSRRPPSSPTH
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccgggggatggaagaccttattcctcttgtgaataaaatgcaagatgccttc
tcggctatcggtcaaaattcccagttggatctacctcaaatcgctgtggtcggcgggcag
agtgcagggaaaagctcggtgttggagaacttcgttgggaaagatttccttccccgtggc
tctggcatcgtcacccgccgtcccttggtcctccagctgatcaactgtcccacagaatat
gcagagttccttcactgtaaggggaagaagttcacagacttcgatgaggttcgtggggag
attgaggcggagacggaccgcatcactgggcagaataagggaatctcacctgtgccaata
aatctcagggtctactccccgcatgtcctgaatctgactctggtggacttgccggggatg
accaaggtcccagtaggggaccagcctgcggacattgagcagcagatcagagacatgtta
tatcagtttgtgaccaaggacaactgtctgctactggctgtttccccggccaactctgat
ctggccaactcagatgccctgaagattgccaaagaagtggacccacagggtcagcgaacc
attggtgtgatcaccaagctggatctgatggatgaggggactgacgccagagaaattctg
gaaaataagctgctcccactgcgaagaggttacattggtgtggtgaacaggagtcagaag
gacatagatgggaagaaggacatcacagcggccatggctgcagagaggaagttcttcctg
acccatcctggatacagacacctggctgaacgcatgggcaccccctacctacagaaaaca
ctcaaccagcaactgaccaatcacatccgggacactctgccggggctgcgggccaagctg
cagagccagctgctgtctatagagaaggaggtggaggagtacaagaacttcagacctgac
gacccctcccgcaagaccaaggccctgttgcagatggtgcagcagttctcagtggacttt
gagaagcgtatcgagggctctggggaccagatcgacacagcagagctgtcaggcggagcc
aagatcaaccgcatcttccacgagcgattccccttcgagctggtcaagatggagtttaac
gaaaaggagcttcgcaaggagatcagctacgccattaagaacatccacggcattagaact
ggcctcttcaccccggacatggcctttgagaccattgtgaaaaggcagatcggcaagatc
aaagagccctgccagaaatgtgtggacatggtcatttctgagctagtcaataccgttagg
cagtgtactcagaagctggctcagtaccccatgctgagggaggagatggacaagattgtc
acccagcatatccgagaccgcgagagtcgcaccaaggaccaggtgatgctgctgattgac
attgagctggcctacatgaacaccaaccatgaggacttcattggctttgccaatgctcag
cagaggagcagccaggtggcccagaagaagcaacctggcaacaagcaggatgaaatcatg
ccggagagaggagcggttaatgatcggtttaaggtgatcaggaagggctggctgaccatc
aacaacattggcatcatgaagggaggagccaaggagtactggttcgtcctgaccgctgag
tccctgtcctggtacaaggatgatgaggagaaagagaagaagtacatgctccaggtggac
aacctgaggctgagggatgtggagaagagcttcatgtcgagcaagcagatctttgccctg
ttcaacactgagcaaaggaatgtgtataaggactaccgtcagctggagttggcctgcgag
actcaggacgacatagatgggtggaaggcctccttccttagagccggggtgtatcctgaa
cgcgtcacggaaaaggagggcaagcagagtgaaagtggagatggagagaacggctcagat
aacttcatgcactccatagacccccagctggagaggcaggttgagaccatccgcaacctg
gtggactcctacatggccattgtcaacaagaccatcagggacctcatgcccaagaccatc
atgtatctcatgatcaacaacaccaaggagttcatcaacgcggagctgctggccaacctg
taccactctggggaccagaacagcctgatggaggagtcccaggagcaggcccatcaccgc
gacgagatgctccgcatgtaccatgccctgagggaggccctaaacatcatcggagacatc
agcactaccactgtcaccaccgccatgccgccgcctgtagacgactcctggctgaggccg
gggggaaacaactctgggggcaggtccccagccagcagtcccactccgaacagaagggct
cccccaggtccccctggtcgccctgtctcccgtggctcagcccctggcctccctcctggc
ccccctgtcccctctcgcccaggggcctccccggaccctttcggtgggccccccccatca
gtcccctcccggcctaaccgcgcaccccccggtgtgcccagccgaagacccccgtcctca
ccaacccactag
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