Oncorhynchus tshawytscha (Chinook salmon): 112231008
Help
Entry
112231008 CDS
T05605
Name
(RefSeq) astrotactin-2-like isoform X1
KO
K24479
astrotactin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112231008
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112231008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASTN_1_2_N
ASTN1_2_fn3
Annexin_2
ASTN_2_hairpin
MACPF
FXa_inhibition
cEGF
fn3
Motif
Other DBs
NCBI-GeneID:
112231008
NCBI-ProteinID:
XP_042166967
LinkDB
All DBs
Position
LG33:complement(23532561..24032690)
Genome browser
AA seq
1320 aa
AA seq
DB search
MARRLSHHVVLLLGLLLTGTATVRANRGGAMLEEEREKENDESHCEVKTVTVSTLPVLRE
NEFSFTGVGSGSVAGGGGESRLLLFVRTDLPGRISVMDDLDNTALPYFTLEMSGTGADIS
QVHWKQQWLENGTLYFHVSMSTSEQLIQTTVPTAREPAHVLHEHMHLLHISVMGGLIALL
LLILLFTLVLYTRHRWCKRRRVPQKSASTEATHEIHYIPSVLLGPQGRDSFRGSRQLQHS
SVIGMPIRETPILDDYDCDEDDQMGHTHTSTPNQVHNQLSDGKVLGLEEYGPSQGTLNHS
QHTDSLRKGEDSVQHSLDKRALDPKQETVDALMRRFKESFRTNTTPEISHFQHNVTHNSS
TGRNRGPSHTRVAGSVFGRQGDSGSEGDDETQLKFYTEQHRGRRRSRGCPHSPMNKATLT
LITITTCVLAVVYGTQLSCSLTVKVTLHVPEHFVADGSSFVVSMGSFLDVSNWLNPAKLT
LYYQTNSSTQWVRDYCGQRTTEPCEQLCDQETGECSCHEGYSPDPVHKHLCVRSDWGRNE
GPWPYTNLEKGYDLVTGEQAPEKIFRSSYSLGQGLWLPVSKSFVVPPVELSINPIASCKT
DVLVTEDPGDVREEAIMSTYFEAVDDLLASFGPVRDCSQDNGGCRKNFKCVSDRRVDSTG
CMCPDGLRPMKDGMGCYDYSKGTDCTDGFNGGCEQLCLQQLVPLPDDPTSSNVLMFCGCV
QEYKLGSDGRSCVLQKENCEGPKCQRQDVRFNDTLFGEMLHGYNNKSQQVNLGQVFQMTF
RDNNFIKDFPQLADGLMVIPLPVEEQCRGVLSEPLSNLQLLTGDAQFNEAMGYPMVQQWR
VRSNLYKVKLSAITLSTGFSKVLKTLTAESTREELLSFIQQYGSHYVSEALYGSELSCTI
YFPSKKAQQQLWLQYQKEATDQGSRRELKSMPFISYLSGLLKTQLLTEDLVSGVEIRCEE
KGSCPSACHLCRQAGREQPSPIPVLLEVSRIVPLYNLVQDNVTKEAFKSATMSSYWCAGK
GDVIDNWCRCDLSAFSKDGLPNCSPLRQPVLRLAPILEPSSTMVALEWLDVEPLIGYKVS
DYIIQHKRVEDPSEAEIYTGEVLSLVDDLFSGLGSSCVVAGRRNGDHPHSVLYSLVFKCL
EPDSLYKFTLYAVDSRGSRSESSFVSVRTSCPMVDDSRAEEIADKVYNLYNGYTSGKEQQ
TAYNTLMEIPPPLLYRVQHHYNSHYEKFGDFVWRSEDELGPRKAHLILRRVERISRYCRA
LLHSAYIQSRTDTMAYMFCRNEEVRPPSSVWHSSLQETRTTCMEKLISVQRNTYGNAKLR
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggagactatcgcaccacgtcgtccttctcctggggctcttgctgacagggacc
gctacagtccgggcaaacagagggggagcgatgcttgaagaggagagggagaaggaaaac
gacgagagccattgtgaagttaaaaccgttaccgtttctacccttcctgtactccgagag
aatgagttcagtttcaccggcgttggctcggggagcgtggccggaggaggaggggagtcc
cggctccttttattcgttagaacagacctacctggaagaatttccgttatggatgatctc
gacaacaccgctctcccatacttcacactggagatgtcaggtactggggcagacatatct
caggtgcattggaagcagcagtggttggagaacgggacactgtatttccacgtgtccatg
agcacctctgagcagctgatccagaccaccgtacccacggcccgggaacctgctcatgtc
ctgcacgaacacatgcacctgctgcacatctctgttatgggaggcctgatcgctctcctc
ctcctcatcctcctcttcaccctggtgctgtacacacgtcaccgctggtgcaagcgccga
cgtgtcccccagaaaagcgccagcaccgaggccacccatgagatccactacatcccctct
gtgctgctgggaccccagggtagggacagcttccggggctcccggcagctccagcacagt
tctgtcattggcatgcccatccgggagacccccatccttgatgactatgactgtgatgag
gacgatcagatgggacacacacacacctccacacccaaccaggtccacaaccagctgagc
gatgggaaagtcctgggcttggaggagtatggccccagccaggggacactgaaccacagc
cagcacactgacagtctgaggaagggggaggacagcgtccaacacagtctggataaaaga
gcccttgaccccaagcaggagacagtggatgcattgatgcggcggtttaaggagagtttc
cgtactaacaccaccccggagatctcccactttcaacacaacgtcacacacaactcttct
acaggacgcaacagaggcccaagccacaccagagtggctggtagtgtgtttggtcgccaa
ggagactctgggtcagagggtgatgatgagacccagctgaagttctacacagagcagcac
aggggacgccgacgcagcagaggttgtccacacagtccgatgaacaaagccactctgacg
ttgatcaccatcactacgtgtgtcctggctgtggtttacggcacacagctctcctgctct
ctcactgtcaaggtcactctccacgtgcctgaacactttgtcgccgacggaagcagtttt
gtggtgagcatgggcagcttcctggatgtgtctaactggctgaaccctgccaaactgacc
ctttattaccagacgaactcctccacccagtgggtcagagactactgtggacagaggacc
actgagccctgcgaacagctgtgtgaccaagagacaggagaatgcagctgtcacgagggc
tattctcccgacccagtgcataaacacctctgtgttcgcagcgactggggccgcaacgaa
ggtccctggccttacaccaacctggagaagggttatgacctcgtcacaggggagcaagct
ccagaaaagatcttcaggtcatcctacagcctgggtcagggtctgtggctgccagtgagt
aagagctttgtggtgccaccggtggagctgtcaatcaaccccatcgccagctgcaagact
gacgtgctggtgacagaggaccctggggacgtcagggaggaggccatcatgtccacttac
tttgaggcagtagatgatctcctggcgtctttcggcccggtccgagactgttcccaggac
aacgggggctgcaggaagaacttcaagtgtgtgtcggaccgcagagtcgactcaacaggc
tgtatgtgtcccgacgggctgcggccaatgaaggacggcatgggttgctatgactactca
aagggcacggactgcacggatggcttcaacggtggctgtgagcagctgtgtctccaacag
ctggtgcccctaccagacgatcccacctccagcaacgtcctcatgttctgtgggtgtgtg
caggagtacaagctggggtcagacggacgctcatgtgttctccagaaagagaactgtgag
gggccaaagtgccagagacaggatgtccgcttcaatgacaccctgtttggggagatgctg
catggatacaacaacaagagtcagcaagtaaacctgggacaggtcttccagatgaccttc
cgggacaacaacttcatcaaggacttcccccagctagcagatggactgatggtcatcccg
ttgcctgtggaggagcagtgtagaggagtgctgtctgagccactgtcaaatctacaactc
ctcacaggcgatgcccagtttaatgaggctatgggctatcccatggttcagcagtggaga
gtgaggagcaacctgtacaaagtaaagctcagcgccatcactttgtctacaggtttctcc
aaggttttgaagacgctgactgcagagagcaccagagaggagctgctgtcctttatccag
cagtacggcagccattacgtgtctgaggccctgtacggctccgagctcagctgcaccatc
tacttccccagcaagaaggctcaacagcagctctggctgcagtaccagaaagaggcgaca
gaccagggaagcaggcgcgagctcaagtccatgcccttcatcagctacctgtctgggctg
ctgaagacccagctgctgacagaggacctggtgagtggcgtggagatccgctgcgaagag
aagggcagctgtccgtcggcctgccacctgtgccgtcaggcaggccgcgagcagccctcg
cccatccccgtcctgctggaggtcagccgcatcgtgcccctctacaacctggtgcaggac
aacgtcacgaaggaggccttcaagagcgccacgatgagctcatactggtgtgcaggcaag
ggagatgtcatcgacaactggtgtcgctgtgacctgagtgccttcagcaaagacggcctt
cccaactgcagtcccctgaggcagcctgtgctcagactggcccctatcctagagccctcc
agcaccatggtggccctggagtggctggatgtggagcccctgattggctacaaggtgtct
gattacatcatccagcataagcgggtggaggacccctcggaggcagagatctacacaggt
gaggtgttaagtctggtggatgacctgttctcaggtttgggttcgtcctgtgtggttgcg
ggtcggaggaatggagaccatcctcactctgtgctctactcgctggtcttcaagtgcctg
gaacccgacagcctctacaagttcactctatatgctgtggacagtcgagggagtcgttca
gagtctagcttcgtctcagtgcggacttcttgtcccatggtagacgatagcagagcagaa
gagatagcagacaaggtgtataacctgtacaacggctacaccagtggcaaggagcagcag
acggcctacaacactctgatggagattccccctccgctgctttacagggtgcagcaccac
tacaactcccactacgagaagtttggagacttcgtctggcggagcgaagatgagctggga
cccagaaaagcccacctgatcctgcgcagggtggagaggatcagccggtactgccgtgcc
ctgctccacagcgcctacatccagagccgcaccgacaccatggcctacatgttctgtcgc
aacgaggaggttcggccccctagcagcgtgtggcatagctccctgcaagagacccgcact
acctgcatggagaaactgatctcagtacagcgcaacacatacggcaacgccaagctccga
tga
DBGET
integrated database retrieval system
