Oncorhynchus tshawytscha (Chinook salmon): 112231018
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Entry
112231018 CDS
T05605
Name
(RefSeq) apoptosis-associated speck-like protein containing a CARD
KO
K12799
apoptosis-associated speck-like protein containing a CARD
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04217
Necroptosis
otw04621
NOD-like receptor signaling pathway
otw04623
Cytosolic DNA-sensing pathway
otw04625
C-type lectin receptor signaling pathway
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
112231018
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
112231018
04623 Cytosolic DNA-sensing pathway
112231018
04625 C-type lectin receptor signaling pathway
112231018
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112231018
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Gene cluster
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Motif
Pfam:
PYRIN
CARD
Glyoxalase
Motif
Other DBs
NCBI-GeneID:
112231018
NCBI-ProteinID:
XP_024253285
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Position
LG03:21520993..21523774
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AA seq
198 aa
AA seq
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MSKAVGDILIGVLDDLGEAELKKFRRKLCDRKQEPKVRRDIVEKADPVDLVDILTRTFTE
DGAVNVAIEVLAAINCQDVAKELMEFKKSPGSCVTSGDRMASATGPTTMNQDKHFVDHHR
AALIDRVSQVEPLLDRLLERGIITPNTYSDVKANRTTQNRMRELYDGPLKACGPKGKDIF
LDILMEQEPFLISDLKGE
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagccgttggcgatatattaattggagtcctggatgacttgggagaggctgaa
ttgaagaagttcagacgtaaactctgtgaccgcaagcaggagccaaaagttcgcagggac
attgttgagaaagctgacccagtggacttggtagacattttgacccgtaccttcactgaa
gacggggctgtgaatgtggctatagaggtcttggctgcaattaactgccaagatgtcgca
aaggaactgatggaattcaagaaatctccgggatcttgcgtaacatctggtgatagaatg
gcaagtgcaactggaccaacgacgatgaaccaagataaacactttgtggaccatcaccgg
gcggccctgatcgacagagtgagccaggtggaacccctattggatagactcctggagagg
ggaatcatcaccccaaacacctacagtgacgtgaaggctaacagaaccacccagaacagg
atgagggagctctacgatggccctctgaaagcatgtgggcctaaaggcaaagatatattc
ttagatatcctgatggagcaggagccattcctaatcagtgacctgaagggggaataa
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