Oncorhynchus tshawytscha (Chinook salmon): 112231038
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Entry
112231038 CDS
T05605
Symbol
arrdc1b
Name
(RefSeq) arrestin domain-containing protein 1b
KO
K26228
arrestin domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112231038 (arrdc1b)
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
112231038 (arrdc1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Arrestin_C
Arrestin_N
Vps26
Spo0M
LDB19
Motif
Other DBs
NCBI-GeneID:
112231038
NCBI-ProteinID:
XP_024253307
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Position
LG33:complement(25800485..25853957)
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AA seq
442 aa
AA seq
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MGKLQEFDITFTNNKVVYSPGESISGTVKITSGSSLQYKAIKVNCLGSCGVSNKMNDTSW
TLEEQYFSSTLSVADKGTLAAGEHSFPFQFVIPVAAPTSFEGPFGKIVYRVRAVIDTPRF
SKDYKAQKPFYLLNLLNLNQVPDIEQPSYAVTTKRFSYLLVKTGTLMLKACSDLRGYTPG
QIIRLATEIHNKSGKDTGCVLASLIQKVTYKTKRALYDLRTIAEVEGAGVKAGKHAEWRE
QIIVPPLPQSALAGCSLIEIDYFIQVSLKSPETVVTLPIYIGNIAVNLTPSRAMPSTPAP
TPISPNTGLEGVTPSAPPAEEDLEEELGAGASVSEEIPTKSHSQQDQSGRPPTMSPSAFS
YTPGAAFPPSQRRADDTSAPLFCVSTGSTIPFFTEGNVTPVPTSCPLILPPEYSTWDYPH
EPPPTYEESCSSNNSSFNNSRP
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcttcaggaattcgatattacttttaccaacaacaaagtggtctacagccct
ggcgaatccataagtggaactgtgaaaattacaagtggtagctcactgcaatataaggcc
attaaggtgaactgcctgggatcatgtggggtctccaacaaaatgaacgacacgtcgtgg
acactggaagagcaatacttcagcagcacactgtctgtagctgacaaaggtaccctggca
gctggcgagcacagtttccctttccaatttgtcatcccagtggctgcaccaacctccttt
gaagggccctttgggaaaattgtttaccgtgtgagagccgtcatagacacacctcgcttc
tccaaggactacaaggcccagaagcccttttacctactcaacctgctcaacctcaatcaa
gtgcccgacattgagcaacccagttatgctgtgaccactaagaggttcagctatctcctg
gtgaagacgggcaccctcatgctgaaggcttgcagtgacctgaggggatacacaccaggc
cagatcatcagactagccactgagatccacaacaagtcaggcaaggacacgggctgcgtg
ctggccagtctcatacagaaagtgacttataagaccaaacgagctttgtacgacctgcgg
accatagcagaggtagagggggcgggagtgaaggcgggaaaacacgctgagtggcgagag
cagatcatcgtaccgcccctcccccagtctgccctggccggctgcagcctcatagagatc
gactacttcatccaggtatcactaaaatcccctgagacggttgtcactttacccatctac
atcgggaacatcgctgtcaacttgaccccgtcacgagctatgccctcaaccccagcccca
acacccatcagccctaacaccggcctggaaggggttacccccagcgcacccccagctgag
gaggacctggaggaggagttgggtgcaggggcttcagtcagcgaggagatccccactaag
agccactcccagcaggaccaatccggccggccccccaccatgtcccccagtgcatttagc
tacactcccggtgcagctttcccacccagccagcgacgtgccgacgacacctctgcgcct
ctgttctgtgtgtccactgggtccaccatccctttctttacagagggaaacgtcacccca
gtacccacgtcctgtcctctcatactcccccctgagtacagcacctgggactacccacat
gaaccccctcccacctatgaggagagctgcagcagcaacaactccagcttcaacaacagc
aggccgtag
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