Oncorhynchus tshawytscha (Chinook salmon): 112231059
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Entry
112231059 CDS
T05605
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03015
mRNA surveillance pathway
otw04261
Adrenergic signaling in cardiomyocytes
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112231059
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112231059
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
112231059
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112231059
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112231059
03036 Chromosome and associated proteins [BR:
otw03036
]
112231059
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112231059
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112231059
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112231059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
TYW3
Motif
Other DBs
NCBI-GeneID:
112231059
NCBI-ProteinID:
XP_042167684
UniProt:
A0A8C8HHL4
LinkDB
All DBs
Position
LG33:complement(27262812..27277535)
Genome browser
AA seq
448 aa
AA seq
DB search
MAGTGGGSNDVQWCFSQVKGAIDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEI
ENKSQPQSRSEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTI
KLWKISERDKRLEGYNLKEEDGRCIDPNTVTALRVPVFRPMDLMVEASPRRVFANAHTYH
INSISINSDHETYLSADDLRINLWHQEITDRSFNIVDIKPVNMEELTEVITAAEFHPNQC
NTFVYSSSKGSIRLCDMRASALCDKHSKLFEEPEDPSNRSFFSEIISSISDVKFSHNGRY
MMTRDYLSVKIWDLNMETRPVETFQVHEYLRSKLCSLYENDCIFDKFECCWNGNDSVVMT
GSYNNFFRMFDRGQRRDVTLEASRESSKPRQVLKPRKVCAGGKRKKDEISVDSLDFNKKI
LHTAWHPQDNIIAVATTNNLYIFQDKVN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaactggaggtgggagcaatgacgtgcagtggtgcttctcacaggtgaagggt
gccattgatgatgacgtggccgaagccgacatcatatctactgtggagttcaaccactca
ggagagctgcttgccacaggagacaagggcggcagggttgtcatctttcagcaggaaata
gagaataagagtcagccacagtcccgcagtgagtacaatgtttacagcactttccagagc
catgagcccgagtttgactacttgaaaagtttggagattgaggagaagatcaataaaatc
cgctggctgccccagaagaacgcagctcagttcctgttgtccactaacgacaaaactata
aagttgtggaagatcagtgaacgagacaagcgactggagggttacaacctaaaagaggag
gatggacgctgcatcgaccccaacactgtcactgcacttcgggtgcccgtgtttagacct
atggaccttatggtggaggcgagccctcgaagggtgtttgccaacgcccacacctaccac
atcaactccatctcaattaacagtgaccatgagacatatctatccgcagacgacctgcgc
atcaacctctggcaccaggagatcactgaccgcagctttaacattgtggatataaagcca
gtcaacatggaggagctgacagaggtgatcacagcagctgagttccatcctaaccagtgc
aacacctttgtctacagcagcagtaagggctccatccgcctctgtgacatgagggcatca
gcgctatgtgacaagcactccaaactgttcgaggagccagaggaccccagtaaccgctcc
ttcttctctgagatcatttcatccatctcagatgtcaagttcagccacaacggacgctac
atgatgaccagagactacctgtctgtcaagatctgggacctgaacatggagaccaggcct
gtggagacgttccaggttcacgagtacctcaggagtaagctgtgctcgctctatgagaac
gactgcatctttgacaagtttgagtgctgctggaatggaaacgacagtgtggtgatgaca
ggctcgtacaacaacttcttccggatgtttgaccggggccagcggcgggacgtgaccctg
gaggcgtcccgggagagcagtaagccacggcaggtcctgaagccccgcaaggtgtgtgcc
ggcgggaagcggaagaaggacgagatcagtgtagacagcctggacttcaacaagaaaatc
ctccacactgcctggcacccccaggacaacatcatcgctgtggcaaccaccaacaacctc
tacatatttcaggacaaagtgaactag
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