Oncorhynchus tshawytscha (Chinook salmon): 112231131
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Entry
112231131 CDS
T05605
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112231131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112231131
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112231131
Endosome - Golgi transport
Arf GTPase associated proteins
112231131
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112231131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
RhoGAP
PH
PH_6
Motif
Other DBs
NCBI-GeneID:
112231131
NCBI-ProteinID:
XP_024253472
LinkDB
All DBs
Position
LG33:complement(30146890..30166445)
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AA seq
1105 aa
AA seq
DB search
MSAPLGPDMPVPVPKPRTRYKRAGGSPQIQLSSDRDLIHDTPDTGIHSRGIPPANDLLAE
KEDNPAIILNKPAITSPAEQNPSPCNFLLFRSDSGVTPSYPVLDSNGLCPSVWLSFSPHS
PAADTDPYVSLAADTDPYVSPAADTDPYVSPAADTDLYVSPAADTDPYVSLAADTDPYVS
PAADTDPYVSPAADTDPYVSPAADTDPYVSPAADTDPYITDVADWEKCPGSGSESSNDDD
AITEEIKNPSHMNNVASGHVCIGVVPSGKPPVEKESMQTRPLKQKIPRAATIRVSRRKQA
AASGGATQAAESSRRENVVSRSSWLDVWKGRRHNVLWATLDGPLVSFWKKRTDKFTDLVF
HVSSITNVCKQDKGRFSLYFCKKHFEFMAHNKAVQEGWVTSLLASRGWDPPAPPEQHGAL
TMKDPRSNRVYAAICGHNLWIYNNKEDFQLGVGLTYVSMNVASVKQTGRHNFSLITPYKT
FNFSTDSSRELAVWLGSLNQVILSALSCSEVAHRLWASPWNKVCADCGSANPEWASVNLL
VVVCEACAGQHRSLGIHVSKVRSLKLDSKVWTEPLILLFVYYGNKAANDVWGHNVPGAEQ
ILPDSSVDQRGDFIRAKYTKGRYRFTHPLASSQRLLNQRLCEVVCGPNVPETMSLLCSGA
RVLCHSGDSQCPTPISLAERAGQAMQTELLRHNEYTDAPAYVHQVTGSLLGTSDPPSAAG
EEELHGKLEEDRFLFSQENDSAACDVLDLREVISIFHSSNGSTHEFEMVTLTDELVCNAD
TEEGLLNHLLHILRVVLPGPIDEEELDGVFAVSRVSLREGGGLQHTEVWAVLRGGQVLVY
PTDQQRHRERLTLNPETQYKIDSSENTIELVTGERTMSMQFERDHSCQSWHSLLKRAVTT
KRKQRPSLYELPPNAIGNVPPAIERCISHITQYGLKVDGLYRRCGLATKVSILVEALSRS
PKTAPLEKDEQGLLDAAGALKQYVRQQVVLIPQTQRELWVKAAAHTEENLRLATYRRLLK
KLPPDNRITLNALCGHFYIVQLYSVENRMTAQNLALVFVPTLFQELAMNTNMVRLTRELI
INHTLIFLGKEQESDMESEELITKL
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccccctcggtccagacatgcctgtgccagtacctaaaccaaggactcgctac
aagcgggctggagggagcccacagatccagctctcttctgatcgggatttgatacacgat
acacctgacacaggaattcatagcagaggtattccacccgcaaatgatttgctggcagaa
aaggaagacaaccctgccattatcctaaataagcctgccattaccagtccagcggagcag
aatccaagcccgtgtaacttccttctcttcagatctgattctggagtgactccatcttac
ccagtactggacagtaatggactctgtccatctgtctggttgtccttctctccacacagt
ccggctgcggatactgacccctacgtcagtctggctgcggatactgacccctacgtcagt
ccggctgcggatactgacccctacgtcagtccggctgcggatactgacctctacgtcagt
ccggctgcggatactgacccctacgtcagtctggctgcggatactgacccctacgtcagt
ccggctgcggatactgacccctacgtcagtccggctgcggatactgacccctacgtcagt
ccggctgcggatactgacccctacgtcagtccggctgcggatactgacccctacatcact
gacgtagctgactgggaaaaatgccctggatctggatctgaatcgtccaatgatgacgat
gccattactgaagaaataaagaacccatcccacatgaacaatgtggcgtcagggcatgtt
tgtattggtgttgtccccagcgggaaacctcctgtggaaaaggagtctatgcagaccaga
cctctcaaacagaagatcccacgtgcggccaccatccgtgtcagcaggagaaaacaggca
gcagcgagcggtggtgctacccaggcagcagagtcctctcgtagggagaatgtggtgtcc
cgatccagctggctggatgtatggaagggccgcaggcacaatgttctgtgggccacgctg
gatggaccgttggtatcattttggaagaaacgcacagacaagttcacagacctagtgttc
catgtgtcaagcatcaccaacgtctgcaagcaggacaaaggacgcttctccctttacttc
tgcaagaaacactttgagttcatggcgcacaacaaagcggtgcaggagggctgggtgacg
tccctcctggcctctcgtggatgggaccccccagcccctccggagcagcatggagccctg
accatgaaggaccctcgcagcaacagagtgtacgcggccatctgtggacacaacctatgg
atctacaacaacaaagaggacttccagttgggggttgggctgacctatgtgtccatgaac
gtggcgtcagtgaagcagactggccgtcataacttcagcctcatcacaccgtacaaaacc
ttcaatttctccacagactcatcgagggagctggcggtgtggctggggagtctgaaccag
gtgatcctcagtgccctgtcatgcagcgaggtggcccaccgactctgggccagcccatgg
aacaaagtgtgtgccgactgtggcagtgccaaccccgagtgggcctcagttaacctgctg
gtggttgtctgtgaggcctgtgcaggtcagcatcgctctttgggcatccatgtctccaaa
gtgagaagcctgaagttggacagtaaagtgtggactgaacctttgattctgctatttgtc
tattatgggaacaaagcagccaatgatgtatggggtcacaatgtgccgggtgcagagcag
atcctgccagactcctctgtggatcagaggggggacttcatcagggccaagtacaccaag
ggccgatacagattcacccatcctctagcctccagccagagactgctcaaccagaggctg
tgtgaggtggtgtgtggccctaatgtcccagagaccatgtcattgctgtgctcgggggcc
cgggtcctgtgccactcaggggactctcagtgccccacgcccatctccctggcagagcgg
gctggacaggccatgcagacggagctgctcagacacaacgagtacacagatgcccctgcc
tatgttcatcaggtcacagggtctctgctgggcacctctgaccctccttctgctgcagga
gaggaggagctccatgggaagttggaggaggaccgcttcctgttctcccaggagaatgac
tctgcagcctgtgatgttctggacctgagggaggtcatctccattttccacagctccaac
ggatcgactcatgagtttgaaatggtgactctgacggacgagttggtgtgcaatgctgac
actgaagagggtctactgaatcacctgcttcatattctcagggtggtgttgcccgggccc
atagatgaggaggagctggacggggtgtttgctgtgtcccgggtgtctctgagggaggga
ggaggcctgcagcacactgaggtctgggcagtgctccgtggaggtcaggtcctcgtctat
cctactgaccagcagcgccacagagagaggctaacactcaaccctgagactcaatacaag
atagattcctctgagaacaccatagagctggtcactggagagagaaccatgtccatgcag
tttgaacgagaccacagctgtcagtcctggcacagcctactgaaacgggcagtgaccaca
aagaggaagcagcgcccatcactgtacgagctgccacccaacgccattggcaatgtgccc
cctgccattgagaggtgtatctcacacatcacacaatatggcctgaaggtggatgggctg
taccggcgctgtggcttggccactaaggtcagcattctggtggaagccctcagcagatca
cctaaaactgcccctctggagaaagatgaacagggtctcctggacgctgcaggggccctg
aagcagtatgtccgccagcaggtggtgctcatccctcagacacaaagggaactgtgggtc
aaggctgcagcccacacagaagagaaccttagactggctacctaccgcagactcctgaaa
aagctgccccctgacaacagaatcacactcaacgccctgtgtggacacttctacatagtt
cagctgtacagtgtagagaaccgtatgacagctcagaacctggcgctggtgtttgtccca
acactgttccaggagctggccatgaacacaaacatggtgcgcctcaccagagaactcatc
ataaaccacacactcatcttcctgggtaaagaacaagagtctgacatggagagtgaagaa
ctcataacaaaattatag
DBGET
integrated database retrieval system
