Oncorhynchus tshawytscha (Chinook salmon): 112231158
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Entry
112231158 CDS
T05605
Symbol
hif1al2
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like 2
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
otw04140
Autophagy - animal
otw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112231158 (hif1al2)
04137 Mitophagy - animal
112231158 (hif1al2)
04148 Efferocytosis
112231158 (hif1al2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112231158 (hif1al2)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
112231158 (hif1al2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
bHLH_HIF1A
PAS
HIF-1
PAS_4
HIF-1a_CTAD
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
112231158
NCBI-ProteinID:
XP_024253513
UniProt:
A0A8C8CVE9
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All DBs
Position
LG33:31132699..31154584
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AA seq
724 aa
AA seq
DB search
MFPHLGNSLEDACDQKLHKTKRQKDRINGQKRSRVSTERLRAQSRVAAKSRRERERRLFG
ELAAWLPLPSGLTGHLDKASIVRLTLDYLRLRALLDHRDNVTPETRVCSDTVHFTMHGRY
PMAGIFSVETVLESAVGGFMLLVSQNGQVIFTTGDIRTHTGINQMDLIGRSLFDFMHHCD
QREVRDILSKMIATERQQQCDFLLRVKSTLTSQGRAVNQRHTRWKVIHCVGVKKQSHLPE
SACLVLMCRPLPISQCIIRDASLNHKTFLSGHHPDMRFTYCHSGVKGLTGYTETELLGQS
VYQYYHTSDCQHIHKAHQSLLSKGQATMGRYRLLLKGGGYVWAETDASVVYNNQTGQPQS
VVCINYILSEVELPEMVFSLQQTEPLLRPCYSDLVGPILQNETYPAAETAVHLRNTKIPT
PEHNNEIQTYEGYSELNREDQMNMNSLSELCELDLDSLAPYIPMDGEDFLLTPVLDGILA
MIEGPVLPPGLEGHCSLGKSPISAGSFTTHQMKTLQMEPPCDSGVSHTVKESEFGDHMKS
VYRGGSAVFKEGPDHAGLEGLVPNEQWSEKHKSCRHPQALMAAAARLPYRTVEYFPIHPQ
DGSPCLCGSPSRQVLWKYTQQPKIPSIGPQPPTNHIDEMSTCHVPFSLPVLSRLECEVTL
GPTSCLLQGSEITSVLDQAPSRFLHMTTWGINQLSTQYAHPCYAHRSAIEVSSGTSTSYA
EWIT
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctcatttaggaaattctctggaagatgcttgtgatcaaaagctccacaaaaca
aagagacagaaggacagaattaatggacagaagagaagcagggtgagtacggagcggctg
cgggcccagtcccgtgttgcagctaagagtaggagggagagagagagacgtttgtttggg
gagctggcagcatggctacctctgccctctggtctgactggccacttagacaaggcttct
atcgtcagactcacactggactacctgcgtctgagagcgctgctagaccatcgagacaat
gtaacaccagagaccagggtctgctctgacacagtccacttcaccatgcacgggcgatac
ccaatggctgggattttctctgtggagacagtgctggagtctgctgttgggggtttcatg
ctcttggtgtctcagaacggccaagttatcttcactacaggggacataaggacacacact
ggcatcaaccagatggatctgattggtaggagtctgtttgacttcatgcaccactgtgac
cagagggaagtcagagatatcctctcaaaaatgatagctactgagagacaacagcagtgt
gacttcctcctccgtgtgaagagcactctgacctctcagggtcgagctgtcaaccaaaga
cacacacgatggaaggtgattcactgcgttggggttaagaaacaatctcaccttccagag
tcagcctgtcttgtcctaatgtgccgacccttacccatctcacaatgcatcatcagggat
gccagcttgaatcacaagaccttcctgagcggacatcacccggacatgaggttcacctac
tgccactcaggtgtcaaggggttgactggatatacagaaacagaacttctgggccagtct
gtgtatcagtattaccacacatctgactgccagcacattcacaaagcacaccagagcttg
ctctctaagggacaggctaccatgggcaggtaccgtctgctgctgaaaggtggtgggtat
gtgtgggcagagacggatgcatcggtggtgtacaacaaccagactgggcagccccagagt
gttgtctgcatcaactacattctaagtgaggtggagctaccagagatggtgttctcactg
cagcaaacagaacctctactgaggccctgttactctgatcttgtggggcccatcctgcag
aatgagacctatcctgcagcagagacagctgttcatctacgcaacacaaaaataccaact
ccagaacacaacaatgagatccaaacctatgagggatattcagagctcaaccgagaggat
caaatgaacatgaactcactctctgaactatgtgagctggacctggactcgttggctcca
tacatacccatggatggagaagacttcctcctcactccagttttagatgggatcttggcc
atgatagaaggtcctgttcttccacctggtttggaaggccattgttccttggggaagtcc
cctatatctgctggttctttcaccacacatcaaatgaaaaccttgcagatggagccccct
tgtgactcaggggtgtcacatacagtcaaagagtcagagttcggggaccatatgaagtca
gtctatagaggaggcagtgctgtattcaaggagggccctgaccatgccggattggagggc
cttgtcccgaacgaacagtggagtgagaaacacaagtcctgtagacatccacaggcactt
atggctgctgctgctaggctgccttaccggaccgtggaatatttccccattcacccacaa
gatggatccccttgcttgtgtggatcaccatcaaggcaagtgttgtggaaatacacacag
cagcccaaaatcccaagcataggccctcagccacctaccaatcatatagacgagatgtca
acatgccatgttcctttcagcctgccagtactgagcaggctggaatgtgaggtcacactg
gggccaaccagctgcctgcttcaggggtcagagatcacctccgtcctggaccaggccccc
tccagattcttacacatgacaacatggggcataaatcagctctccacccaatatgcccat
ccttgttacgcacacagatcagctattgaagtcagctctggcacatcgacatcatatgct
gaatggataacatga
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integrated database retrieval system
