Oncorhynchus tshawytscha (Chinook salmon): 112231173
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Entry
112231173 CDS
T05605
Symbol
si:dkeyp-50d11.2
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
otw04210
Apoptosis
otw04217
Necroptosis
otw04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112231173 (si:dkeyp-50d11.2)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112231173 (si:dkeyp-50d11.2)
04217 Necroptosis
112231173 (si:dkeyp-50d11.2)
04218 Cellular senescence
112231173 (si:dkeyp-50d11.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112231173 (si:dkeyp-50d11.2)
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
112231173 (si:dkeyp-50d11.2)
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C2: calpain family
112231173 (si:dkeyp-50d11.2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
EF-hand_5
Ndufs5
Motif
Other DBs
NCBI-GeneID:
112231173
NCBI-ProteinID:
XP_024253538
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All DBs
Position
LG33:31532401..31540179
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AA seq
712 aa
AA seq
DB search
MEQVMEQVIECVFASGVAARLRSQWDRNEGIGQNDKALKFLGQDFEYLRSHSLQSRRLFE
DDAFPAQISSLGFKELGSRSTKTQGVRWMRPTEFCSDPHFIVDGATRTDVCQGALGDCWL
LAAIASLTLNETLLHRVVPHGQSFHQQYAGIFHFQFWQFGEWVDVVIDDRLPVKDGKLLF
LHSAEGAEFWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMFELKKAHPDLFSI
ISRAVERGSLLGCSIDISGVFEMEAMTFKKLVKGHAYSVTGVEEVEFKGSPTKLLRIRNP
WGEVEWTGAWSDNSREWAGVDPSVRARLYNRSEDGEFWMSFRDFLREFSRLEICNLTADA
LQASQVKKWSSTLYPGEWRRGSTAGGCRNYPATFWLNPQFKVALQHPDTDGQSGCSFLVA
LMQKDRRRQRREGKDMETIGFTIYEVPEEFTGRTGVHLKRDFFLTHGSSARSELFINLRE
VSTRFCLPQGEYIVIPSTFEPQKDGDFVLRVFSEKPADSQELDDDITADLPEEVELDESQ
IDAGFKGLFRQLAGAEMEISASKLQTILNRIISKHKDLKTDGFGKEACRCMITLMDTTGT
GKLGLTEFHVLWEKIKRYLTVFRKFDLDKSGTMSSYEMRLALESAGFKLTNHLFQLIILR
YAKEDLNVDFDNFVNCLIRLETMFKTFKEMDTDVDGVVSFSFFQWISLTMFA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggtgatggagcaggttattgaatgtgtgtttgcctctggagtggctgctcgt
ttgaggagccagtgggaccgcaatgagggcatcggtcagaatgacaaggccctgaagttc
ttaggccaagactttgaatatctccggtcccacagtctgcagagcagacggctctttgag
gatgatgcattccctgctcagatctcgtcgctgggcttcaaggagctggggtcacgctct
acaaagacacagggggtccgatggatgcgccccacggagttctgctctgaccctcacttc
atcgtagacggagccactcgcacagacgtctgccagggagctctgggtgactgttggctg
ctggcagcgattgcttcacttacactgaatgagactctactacatcgggtggtgccccat
gggcagagcttccaccaacagtatgctgggatctttcacttccagttctggcagtttggg
gagtgggtggatgtggtgattgatgacaggctgccagtgaaggatgggaagctgctgttt
ctccactcagcagagggggctgagttctggagcgccctgctggagaaggcctacgcaaag
ctcaatggctgttacgaggccctctcagggggcagtacatcggaggggtttgaggacttc
acagggggcgtgacagagatgtttgagctgaagaaggcccatccagacctgttcagcata
atcagtagagcagtggagcgaggttccctgctgggatgctccatagatatctctggtgtt
ttcgagatggaggcgatgacattcaagaagctggtgaaaggccatgcctactctgtgaca
ggtgtggaggaggtggagtttaaaggaagtcccaccaagctcctgcggatcaggaacccc
tggggagaggtggagtggaccggagcctggagtgacaattcaagagagtgggctggagtt
gacccatcggtcagagctagactgtacaaccgtagcgaagatggcgagttctggatgtca
ttccgtgactttctgcgtgagttcagccgtttggaaatctgtaatctgacagcagacgcc
ctgcaggccagccaagtgaagaagtggagctcaacgctctaccctggagagtggaggaga
ggcagcactgcagggggctgcaggaactacccagcaacgttctggctcaaccctcaattc
aaagtggcccttcagcacccagacacagatggccaatcaggttgcagtttcctggtggcg
ctgatgcagaaggatcgtcgtcggcaacggcgtgaggggaaagacatggagaccattgga
ttcaccatctatgaggttccagaagagtttacaggtcggaccggggtgcatctaaagagg
gacttcttcctgacccacggctccagtgcccggtcagagctcttcatcaacctgagagag
gtcagcacccgcttctgcctgccccagggagagtatatcgtcatcccctccaccttcgag
ccccagaaggacggagactttgtgctcagggtgttctctgaaaagccagctgactcccag
gaattggatgatgacatcacagctgatctgcctgaggaggtagagctggacgagagccag
attgatgcaggcttcaagggtctcttcagacagctcgctggagcggaaatggagatcagt
gcctccaagcttcagaccatcctaaacagaatcatcagcaagcataaggacctgaagaca
gacggctttggcaaggaggcgtgtcgttgcatgataactctcatggataccaccggcact
gggaagctgggcttgacagagttccatgtgctgtgggagaagatcaaacggtacctgact
gtgtttaggaagtttgacctggataaatctggcaccatgagctcctatgaaatgcggctg
gcactggaatcagctggcttcaagttgaccaaccacttgttccaactcatcatcctacgc
tacgcaaaggaagacctgaatgtggactttgataactttgtcaactgtctcatccgactg
gagaccatgttcaagacctttaaagaaatggacactgatgtagatggggtggtttccttc
agcttcttccagtggatctccctcaccatgtttgcctag
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