Oncorhynchus tshawytscha (Chinook salmon): 112231179
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Entry
112231179 CDS
T05605
Symbol
nrxn2a
Name
(RefSeq) neurexin 2a isoform X1
KO
K07377
neurexin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112231179 (nrxn2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112231179 (nrxn2a)
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
112231179 (nrxn2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
OAM_dimer
Motif
Other DBs
NCBI-GeneID:
112231179
NCBI-ProteinID:
XP_042167382
LinkDB
All DBs
Position
LG33:complement(31623537..32009689)
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AA seq
1642 aa
AA seq
DB search
MISRQGRCEVRAVWPLLLTGLLLTVMATALEYEGVPGQWARYGHWEAKATGQLSFALKTN
TSKALVLYLDDGGNCDFLELLIADGRLHLRFTIHCAEPASLHTETHVNDHRWHRVLLTRN
YRETSLVVDNEDKVAEVKSKRSEMVVASDLYVGGISPDVRLSALTSSTVKYEPPFQGLIT
NLKLGETLPVLLDGQGVQNDLEYLCIKQNPCSNRGLCSIHQGEVLCDCTDTGSKGNYCHE
VIQKAVEAKEESVATYKGNEFFSYDLSQMPIQSKLDEITLSFRTLQRNGLLLHTGKSADY
VNLSLRSGAVWLVINLGSGAFEALVEPTNGKFNDNAWHEVRITRNLRQVTVSVDGILSTT
GYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKDVVYKNNEFRLELSRLAAE
RDPQVSVHGDLTFRCEDVAALEPVTFDTPASYLTLPRWNTKKTGSISFDFRTTEPSGLLL
FSHGDRRLQDLDRQPDRQARAHYFAMELMDGFLYLVMDMGSGSIKMKASNKRVNDGEWCH
VDFQREGRKGSISVNSRSTPFSANEGNEILDLEGDMYLGGLPEARQRLILPPEVWTAPLN
LGYVGCMRDLFMDGRSRDLRRLAEIQSASGVSSFCTRETHIRCGRDVCGNGGQCREGWNR
HVCDCTSTGYLGPNCESEATVLSYDGSMYLKVTLPVSMHTEAEDVALRFMSQRAFGLLLA
TTSQDSADTLRLELEAGRVKLTVNLDCIRIDCNLSKGPEMLLAGQKLNDNEWHSVKVVRL
GKNLQLSVDNVTVEGHMAGAHTRLEFHNIETGIMTERRFISVVPTNFIGHLQALSFNGVP
YLDQCKNGDISYCELNARFGMRRIVADPVTFHSRASYLAFSTLQAYASMHLFFQFKTTSP
DGLLFFNSGDGSDFIMVELVKGYIHYVFDLGNGPSLMKGNSEKPLNDNQWHNVVVSRDDN
NVHILKTDSRTVTQHYNGARNLDLKGELYVGGVGKTMYSSLPKLIASRDGYQGCLASVDL
NGRLPDLMADALHRVGQVERGCEGPSNTCTEDSCHHQGVCLQQWEGFSCDCTMTSYGGAF
CSNPGTTYIFGRGGALITYIWAPNERPSTRADRLAVGFSTQQKDAILVRVESTSGLGDYL
QLHIEQGKIDVIFNVGTDDITIGEPAVIVSDGKYHVVRFTRSGGNATLQVDNQPVIERYP
PGNFDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQAAIKIGGQDKGRPFQGQIS
GLYYNGLQVLKLAAESDPSVQAEGNLRLVGDSLSVLTTETTSTTPLAVSDMSTTIMETTT
TMATTTTRRQRSPSMRESISQSQNSDDILVASAECPSDDEDLEECEPGTGGELVLPIITV
DSFESPSIATRHPAFPPPPTSLSPLETTKESLMLSNPHPPCPSDQEDCGDPVEVSAFGSG
ELTESDDEDFYKNSPLVTDRTVLPPPPPAAGEGRAQKPHNPRPPPSAPTTNPDQLHIPAG
KMNTRDQVLLPPVPPSSRNTPGLTYPPNFPHVPTADPTAPGKKIIYPGLVDRIGESSSTT
GMVVGIVAAAALCILILLYAMYKYRNRDESSYRTDQGHSFINNPAAEGNGAMVKLEKTPS
ITATVAKAVTKGNKNKQKEYYV
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atgataagcagacaggggaggtgtgaagttcgggccgtgtggcccctgctattgactggg
ctgctgttgacagtcatggccacggccttggagtatgagggagtccctggtcagtgggca
cggtacggccactgggaagccaaggccacaggccagctgagcttcgctctgaagaccaac
accagcaaggccctggtgctctacctggacgacggaggcaactgtgacttcctggagctt
ctgatcgcagacggccggctgcatcttcgcttcaccatccactgtgcagagccggcctcc
ctgcacacggagactcatgtcaacgaccatcgctggcaccgcgtgctgctcacccgtaac
taccgagagaccagcctggtggtagacaacgaggacaaggtagccgaggtcaagtccaag
aggagtgagatggtggtggccagcgacctttacgtaggcggcatttctccagatgttcgc
ctatctgccctcacgtccagcaccgtcaaatacgagccacccttccagggcctgatcacc
aacctaaagctgggggagaccctccccgtgctcctggatggccagggtgttcagaatgat
ttggaatacctgtgcattaaacagaacccctgcagcaacagaggcctctgctccatccac
cagggagaggtcctctgtgactgcaccgacactggatccaagggaaactactgccatgaa
gttatccagaaagcagtagaagcaaaagaggagtcggttgccacctacaaaggcaatgag
ttcttcagctatgacttatctcagatgcccatccagagcaaactggacgagatcactctg
tccttccgcacgctgcagaggaacggcctccttctccacaccgggaagtcagctgactat
gtcaacctatccctgaggagcggcgctgtgtggcttgtcatcaacctgggctcaggggcc
ttcgaggccctggtggagcccaccaacggcaagttcaacgacaatgcctggcacgaagtg
cgcattacacgcaacctgcgccaggtgactgtctctgtggatgggatcttgtccaccacc
ggctacacccaggaggactacaccatgctgggctctgatgacttcttctacattgggggg
agtcccaacacggctgacctccctggctccccagtcagcaataacttcatgggctgtctc
aaagacgtggtttacaagaacaatgagttcagactggagctgtctcgtctggctgcagag
cgggaccctcaggtcagtgttcacggtgacctgaccttccgctgtgaggatgtggcggcc
ctggagccagtcaccttcgacacgcccgcctcctacctcaccctgcccaggtggaacacc
aagaagaccggctccatctcctttgacttccggaccacggagcccagcggcctgctgctg
ttcagccacggggacagacgtctgcaggacctagacagacagccggacaggcaggccagg
gctcattactttgccatggagctaatggatggctttctctacctggtgatggacatgggc
tctggcagcatcaagatgaaggccagcaacaagagggtcaacgatggggagtggtgccac
gtggacttccagagggaggggcgtaagggctccatctcggtgaacagccgcagcacacca
ttctctgcgaatgaaggcaatgagatcttagacctggagggcgatatgtacctggggggt
ttgcccgaggcacgccagcgcctcatcctccccccagaagtctggacggccccactcaac
ctgggctacgtgggctgcatgcgggacctgtttatggatgggcggagccgggacctgagg
agactggcagagatccagagtgcctctggagtcagcagcttctgcaccagggaaacacac
atcaggtgtggcagagacgtctgtggcaacggtgggcagtgccgtgagggctggaaccgt
catgtgtgtgattgcaccagcacgggctacctaggtcccaactgtgaaagtgaggccacg
gtgctgagctatgatggcagcatgtacctgaaggtgacactgccagtcagcatgcacacg
gaggccgaggacgtggcgctacgctttatgtcccagagggcctttgggctgctgttggcc
accacctcccaggactcagctgacaccctgcgtctggagctggaagcgggccgggtcaaa
ctcaccgtcaacctggattgtatcaggatagactgtaacctcagtaaaggcccagagatg
ctgttagcaggacagaagctgaacgacaatgagtggcactcagtgaaggtggtacgtctt
gggaagaacctgcagctctctgtggacaatgtgactgtggaaggccatatggccggtgcc
cacacccgcctggagttccacaacattgagactggcatcatgacagagagacgcttcatc
tctgtggtgccaaccaacttcataggtcacctgcaggccctctccttcaatggcgtgccc
tacctggaccagtgtaagaacggagacatctcctactgcgaactcaacgcccgcttcggc
atgcgccgcatcgtggctgaccctgtgaccttccacagccgggccagctacctagccttc
tctaccctgcaggcctacgcctctatgcacctcttcttccagttcaagaccacctccccc
gacggcctgctcttcttcaactctggagacggcagtgacttcatcatggtggagctggtc
aaagggtacatccattatgtgtttgacctgggtaacggaccgtcactcatgaagggcaac
tctgagaagcctctcaacgacaatcagtggcacaacgtggtggtgtcccgggatgacaac
aacgtgcacatcctcaagaccgactcccgcaccgtcacccagcactacaacggagcccgt
aacctggacctcaaaggggagctgtatgttggtggtgtggggaagaccatgtacagtagc
ctgcccaagctgattgcgtcccgcgatgggtaccagggctgcctggcctccgtggacctg
aacgggagacttcctgacctgatggcagacgccctccacagggtgggccaggtggagcgg
ggctgtgaaggcccaagcaacacctgtacagaggactcgtgtcatcaccagggggtgtgt
ctccagcagtgggagggcttctcctgtgactgcaccatgacctcctatggaggagcattc
tgcagcaaccctgggaccacgtatatctttgggagaggaggagccctcatcacgtacatc
tgggcccctaatgagaggccgagcaccagagctgaccgcctagctgtgggcttcagtact
caacagaaagacgccatcttggtccgagtggagagcaccagtggactgggagactacctg
cagctgcacatagaacaaggaaagatcgatgtgatcttcaacgtggggacagatgacatc
accattggcgagccggctgtcatagttagcgatggcaagtaccatgttgtgcgcttcaca
cgcagtggtggcaacgccaccctccaggtggacaaccaacctgtcatcgaacgctacccg
ccagggaactttgataatgagcgcctggctattgctagacaaagaatcccataccgactt
ggtcgggtagttgacgagtggctactcgacaaaggacgacagctgaccatcttcaacagc
caagcagcgataaagatcgggggtcaggataagggccggccgttccagggccagatctct
ggtctctactataacggcctgcaggtgcttaagctggcggcagagagtgaccccagtgtc
caggctgaggggaacctgaggctggtgggagactcactgtcagtgctgaccactgagacc
acctccaccaccccactggctgtctccgacatgtccaccaccatcatggagaccaccacc
accatggccaccaccaccacccgcaggcaacgctcccccagcatgagggagagcatctcc
cagtctcagaactcggatgacatcttggtggcgtctgctgagtgtcccagtgatgacgag
gatctggaggagtgtgagcctggaacaggaggtgaattagtcttgcctataataacagtg
gattcctttgagtccccatccatcgccacccgtcaccctgctttcccccctcctcctacc
tccctgtccccacttgagaccaccaaagagtccctgatgctgtccaaccctcaccctccc
tgcccctcggaccaggaggactgcggtgaccctgtggaggtctcagcctttggttcgggg
gagttgacggaatcagatgacgaggacttttacaaaaactcccccctggtcactgacagg
acggtcctgcctcctcctccccctgccgctggtgaaggccgggcccagaaaccccataat
ccccgcccccctccttctgctcccaccaccaaccctgaccagctccacatccccgcgggc
aaaatgaacacccgtgaccaggtgcttctgccccccgtccctccatcatctcggaataca
ccaggactaacttacccccccaatttcccccatgtgcccacagccgaccctacagcccct
ggtaagaagatcatatatcccggcctggtggataggatcggggagtccagtagcaccaca
gggatggtggttggcattgtggcagctgctgccctctgcattctcatcctcctctacgcc
atgtacaagtaccgcaaccgtgacgagagctcctaccggacggaccagggacacagcttc
atcaacaacccagctgctgagggcaacggggccatggtcaagctagagaagacaccaagt
ataacggctacagtagccaaggctgtcaccaagggcaacaagaacaaacaaaaagagtat
tacgtctga
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