Oncorhynchus tshawytscha (Chinook salmon): 112231193
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Entry
112231193 CDS
T05605
Name
(RefSeq) putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112231193
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Gene silencing
Transposable elements
112231193
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GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
Motif
Other DBs
NCBI-GeneID:
112231193
NCBI-ProteinID:
XP_024253578
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Position
LG33:complement(32754044..32756442)
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AA seq
350 aa
AA seq
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MACPFLRDPIDIGAQVVRKTIRTKRLFKDRQNPLSFSEEYINERYHFSSHCIVFLADLLT
PSLSNDTLRSCALTVMQTLCIGLHFFACGEYMHAVGDAENLSVSTVCRAIRRVCIALTRI
LPDFVKFPGHCSQQEVKDGFYRIAGLPNVIGVVDSTHISIKAPSGPEVSDYTNQRSFHSI
NVQMVCDSQCLITNIEAKWPGSVNDFHILQKSVLYHQFQQGCFDGQLVADNEYPCLPFLM
TPYLNPKPGAESCFNEALYETRACIKTTFTTLRSRFGCLKGLRVSPQRACDIIVACMVLH
NVAIIRKEAPPCFSWMPRKNPEPVHCDYQDGTAIRDSIAAQLFLSCSQVL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcccttttttacgagatccaattgacatcggggcacaagttgtgagaaaaaca
atacgaactaagcgtttgttcaaagacagacaaaatcctctaagtttttccgaagaatac
attaacgagaggtatcacttctcgtctcattgtatagtattcctggcggatctgttgaca
ccttcattgagcaacgatacactccgcagctgtgcgcttacagtaatgcaaacactctgc
atcggtttacattttttcgcatgtggagaatatatgcatgcagtcggtgacgctgaaaat
ttgagcgtatccacagtttgtcgagccatacggagagtatgcatcgcactgacgagaatt
ctcccggatttcgtgaagttccctggtcattgttctcaacaagaagttaaagacggcttt
tatagaatagcaggactacctaatgtaattggtgtggtggactccactcacatatccatc
aaagcgccttcaggaccagaggtatctgattatactaatcagagatcatttcacagcata
aatgtgcagatggtttgtgattcgcaatgtctcatcacaaacattgaggcaaagtggcct
ggatctgtgaatgacttccacatactccaaaagagtgtgctgtaccatcagtttcagcaa
ggttgttttgatgggcagcttgtggctgacaatgagtatccctgtcttccattcttgatg
acgccatacctgaatcctaaaccaggcgcagagagctgcttcaacgaggcactgtacgag
acaagggcatgcattaagacaacattcaccacgttacggtcccgatttggttgtttgaag
ggtctcagagtatcgccacagagagcttgtgacataatagtggcatgcatggtccttcat
aacgttgcaatcattcgtaaggaggctccaccctgtttcagttggatgccccggaaaaac
ccagagcctgttcactgtgattaccaagatggtacagcaatcagggatagcattgctgct
cagctctttttgtcatgcagccaagtgttatga
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