Oncorhynchus tshawytscha (Chinook salmon): 112231270
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Entry
112231270 CDS
T05605
Symbol
tnfsf13
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13 isoform X1
KO
K05475
tumor necrosis factor ligand superfamily member 13
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060
Cytokine-cytokine receptor interaction
otw04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112231270 (tnfsf13)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
112231270 (tnfsf13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112231270 (tnfsf13)
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112231270 (tnfsf13)
04090 CD molecules [BR:
otw04090
]
112231270 (tnfsf13)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112231270 (tnfsf13)
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Tumor necrosis fators
112231270 (tnfsf13)
CD molecules [BR:
otw04090
]
Proteins
112231270 (tnfsf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Flu_C_NS1
Motif
Other DBs
NCBI-GeneID:
112231270
NCBI-ProteinID:
XP_024253701
LinkDB
All DBs
Position
LG33:34002334..34005383
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AA seq
235 aa
AA seq
DB search
MTNRYTVHFHGSYLLYAVSLFLACLMVLQSNRVREMQVELRELRQWTSLVCGDIKESSTD
ISRCGISDSHRHTQWNGIRGKREISRHGRRRQRRTAGSSAFLHLVPLSSHSYDEDDYTLV
EWALGLSRLGEGLQVFGEKVTVVTEGTYFIYSQVLYKDTTWTMGHVIKKRLHGIETILMK
CIQSMPSNITVAQNTCYTAGVHYLEPGSTLELSIPRKSAGLVLKPHSTFLGMFRI
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaccgttatacagtacattttcatggctcatatctgctgtacgctgtgtcgctg
ttcttggcctgcttgatggtcctgcagtccaaccgggtcagagagatgcaggtcgaactg
cgggagctgcgtcagtggaccagtctggtgtgcggggacataaaggaatcgtctactgat
atctcgcgctgcgggatatctgactctcacagacatacacaatggaatggaattcgagga
aagagggagatttcaagacatgggagacggagacagcggcgcactgcagggagtagtgcc
tttcttcatcttgttcctctgtcatcacactcatatgatgaagatgactacactctggta
gaatgggctctaggactgagtcgtctaggggaggggctgcaggtctttggagaaaaggtc
accgtggtaaccgaagggacttacttcatctacagtcaggtgctgtataaagacaccaca
tggactatgggtcatgtgatcaagaagcgtctacatggtattgagaccatcttgatgaag
tgcatacagagtatgcccagcaacatcaccgtggcccaaaacacctgctacacagccggt
gtccattacctggagccaggatccactctggaactctccattcccaggaaatctgctggg
cttgtcctcaagcctcactccacctttcttggcatgttcaggatctga
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integrated database retrieval system
