Oncorhynchus tshawytscha (Chinook salmon): 112231301
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Entry
112231301 CDS
T05605
Name
(RefSeq) latent-transforming growth factor beta-binding protein 3-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112231301
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
112231301
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
Plasmod_Pvs28
FXa_inhibition
EGF_2
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
112231301
NCBI-ProteinID:
XP_042167215
LinkDB
All DBs
Position
LG33:35084236..35130731
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AA seq
1261 aa
AA seq
DB search
MPSLIISHLLVIWLGVQRLAWCAERASTRERFKVVIAPLICKRICLKGQCQDTCEQGNNT
TLIGENGQSADTLTGPGFRVVVCPLTCMNGGVCSSRTHCLCPPGFTGRLCQFPLRQMPEA
QAARGNKQPVYTLSVLSDGQSQVEQAAMGRPQLTQTHSVFTLPLAQGAGHHSSEVQFNVR
VHHTHDTSVVIRPLDQSNSKPPHKTVTRLTPQTQKPRGRCFQETTPKQACSSTPLPVLTN
QEDCCGSVGNSWGQNKCYKCPKLPYAGVKLQTIIEDYGSTCPLGYKRLNSTHCQDINECT
MQGVCQNGDCLNTQGSFLCACKPGFTLDRTRCVESPSPVEQAQCFLMATDAGRCEHALPT
PLSQEMCCCTVGKAWGSSCERCPQDGTASFSKICPAGKGYFLHSVRETVAFPPQIHTSLE
QEEVKPPEEPPEMTTPMQLSTHAPRGPEIITKPTPPPIIRLNPDSDPLEVAQTQVSPETD
ECRLNRNLCGHGECVNVHTGYKCECYAGYRLHPQRNACVDDDECDAEPCGHGRGICINTE
GSYRCRCLHGYKLLVYHGKLRCLDVNECSKPDVCGQGGQCVNLPGSYKCDCHKGFRSKSQ
RQPACEDINECLDPSSCPNEQCENTPGSYECVPCFSGHQAQGGVCYDVNECQKRGVCPNG
RCENLPGTYRCLCNEGFLPAADSQGCRDIDECEDDRLCANGRCVNTEGSFQCQCYPGYQR
TQEGSHCEDINECERPSNCQRGRCINSMGSYRCECQKGYMLVGGRRCQDIDECAIDRGLC
QPHGVCENRQGSYVCVCKDGFILSEDKHSCEEIEVDMEDKKECYLNLDDTVFCDSVLATN
VTKQECCCSIGVGWGDHCEIYPCPVYHSSEFHSLCPVGRGFYQEEGVTEYGLSVHIDIDE
CVLFSNEICKEGRCMNTQPGYECYCQQGFYYDSNLLECIDVNECHDESLCTNGQCKNTRG
SFYCTCNSPWTPDASNKKCVIPTVAGVDECQDPLNCKSGHCVDTPGSYYCICSPPWILAT
DRNSCVTLEEQADINECQDPSYCKNGRCVNTPGSFHCICTQPLTFSAALKQCVYDDRTAA
HKDVCFLQVDEDLICSHPRNSPVFTYSECCCHYGRGWGPECRTCPQRNSVIFNRLCDMHL
ETESDGEGDFLAAFANYNPEGDSSEEDSDECSCANGRCVRSYLSTMCDCNTGFRLDHSHT
RCTDIDECAEPGVRVNPCKNARCVNSIGSFKCYCKNGFVPARRPNMCVPGTKAQHIRSRA
L
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgccttctctgatcatttcccatctgctcgtcatctggctgggtgtccagaggctggcc
tggtgcgcagagcgcgcatccacccgggagcgcttcaaagtggtcatcgcccctctcatc
tgcaagagaatttgtttgaaaggccagtgccaggacacttgtgagcagggcaacaatacc
acactgataggcgagaacggacagtcagcggatactctcacaggtcctggattcagagtg
gttgtgtgtccactgacctgtatgaatggaggggtgtgcagctcgcggacccactgcctt
tgcccgccaggtttcactggtcggctgtgccagttcccgctacggcagatgcccgaggcc
caggcggcgcggggcaacaagcagcccgtatacaccctgtcggtgctgtcagacggccag
agccaggtagagcaggcggccatggggcgaccacagctgacacagacccactctgtgttc
accctgcccctggcacagggggcaggtcaccactcatcagaagtgcagtttaatgtgcgt
gtccaccatacacacgacacgtccgttgtcatccgtcctctcgaccaatctaattccaag
ccccctcataaaactgtgacacgcttgacccctcagacgcagaaacccagggggcggtgc
ttccaggagaccacacccaaacaagcttgtagcagtacccctctccctgtactgaccaat
caggaggactgctgtggaagtgtggggaactcctggggacaaaacaaatgttataaatgt
cccaagctaccatatgctggagtgaagctgcagaccatcatagaggactatggttccacc
tgccctctgggctacaagagactcaacagcacccactgtcaagacatcaacgagtgcacc
atgcagggggtgtgtcagaacggggactgcctgaacacccagggtagtttcctgtgtgcc
tgtaagcctggcttcaccctggacaggaccagatgtgtggaatctccgtctccggtggag
caggctcagtgtttcctcatggcaacggatgcgggtcgctgtgagcacgccctacccaca
cccctgtcccaggagatgtgctgctgcaccgtgggcaaggcatggggctccagctgtgag
aggtgtccccaagacggcacagcctccttcagcaagatctgtccagcagggaagggctac
ttcctccacagtgtccgggagacggtggcgttccctcctcagatccacaccagcctggag
caggaggaagtcaagcccccggaggagcctccagagatgaccacacccatgcagctctcc
acccatgccccccgcggccccgagatcatcacaaagcccacccctccacccatcatcagg
ttgaacccagacagtgaccccctggaggtggcacagacgcaggtctcaccagagacagac
gagtgcaggctgaacaggaacctctgtggccatggggagtgtgtcaatgtgcacactggc
tacaagtgtgagtgctacgctggctaccggctccaccctcagaggaacgcctgtgtggat
gatgatgagtgtgatgctgagccatgtggccatggaagaggcatctgcatcaacacagaa
ggctcctatcgctgccgttgtctccatggctacaagctcttggtgtatcatgggaaactc
agatgtctagatgtgaatgagtgctccaagccggacgtctgtgggcaggggggtcagtgt
gttaacctgccagggtcttacaagtgtgattgtcacaaaggcttcaggagcaagtcccaa
cgccagccagcctgtgaagatataaatgagtgtctggaccccagcagctgtcccaatgag
cagtgtgagaacactccgggctcctatgagtgtgttccctgcttctctggtcaccaggca
cagggtggtgtctgctacgatgtcaatgagtgccagaagcgcggggtgtgtcccaacggg
cgctgtgagaacctgccaggaacctaccgctgcctctgtaatgaaggcttcctcccagct
gcagacagccaaggctgcagagacattgacgagtgtgaggatgacagactgtgtgccaat
gggcgctgtgtcaatacagaaggctccttccagtgccagtgctacccaggataccagcgc
actcaggagggcagccattgtgaagatataaatgaatgtgagcgtccctctaactgccag
agggggcgctgtatcaacagcatgggctcctatcgctgtgaatgtcagaagggctacatg
cttgtcggagggaggcggtgccaagacatagatgagtgtgcgatagacaggggtctgtgc
cagcctcatggtgtgtgtgagaacagacagggctcctatgtgtgtgtgtgcaaagacggc
ttcattctgtctgaggacaagcacagctgtgaggagattgaggtggacatggaggataag
aaggagtgttacctgaacctggatgacacagtgttctgtgacagtgtcctggccaccaac
gtcaccaagcaggagtgctgctgctccatcggtgtgggctggggggaccactgtgagatc
tacccctgccccgtctaccactcatctgagttccattccctgtgtccggtgggccgaggt
ttctaccaggaggagggagtaactgagtacggcctttctgtccatattgatatcgatgag
tgtgtgctgttctccaatgagatctgtaaggagggtcgctgtatgaacacacagcctggc
tatgaatgttactgccaacagggcttctattacgacagcaacctactggagtgcattgat
gtgaatgagtgccacgatgagtctctgtgtaccaacggtcagtgtaagaacaccagaggc
tccttctactgtacctgtaactctccctggaccccagatgcttccaataagaagtgtgtc
attcccactgtggcaggtgtggatgagtgccaggatccattgaactgtaagagtggccac
tgtgtggacacccctgggtcctactactgcatctgctctcccccctggatcctggccact
gaccgcaacagctgtgtgaccttagaggagcaggctgatatcaatgagtgccaggacccc
tcgtactgtaagaatgggaggtgtgtgaacacgcccggctcctttcactgtatatgtacc
cagcccctcaccttcagcgcagcgctcaaacagtgcgtctatgacgaccgcacggcggcc
cataaggacgtgtgtttcctgcaggtggatgaggatctgatctgcagccaccccagaaac
agcccggtgttcacctactctgagtgctgctgtcactatggccgtggctggggccctgag
tgtaggacctgcccccaaagaaactcggtgatctttaaccggctgtgtgacatgcacttg
gagacagagtctgatggtgagggagatttcctggcagctttcgccaactacaacccagaa
ggtgacagttcagaagaggactcagatgagtgtagttgtgccaatggccgttgtgtgcgt
tcctacttgagcactatgtgtgattgtaacacaggttttagactggaccactcccacacc
cgctgcacagatattgatgagtgtgctgaaccaggggtcagagttaatccatgcaagaat
gcccgctgtgtcaacagcataggctcgttcaagtgctactgcaaaaatggctttgtccct
gcacgaaggcccaacatgtgtgtaccaggcaccaaggcccaacatatccgttccagggct
ctataa
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