Oncorhynchus tshawytscha (Chinook salmon): 112231312
Help
Entry
112231312 CDS
T05605
Symbol
vps51
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog isoform X1
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112231312 (vps51)
Membrane trafficking [BR:
otw04131
]
Protein recycling
Others
EARP complex
112231312 (vps51)
Endosome - Golgi transport
Tethering complex
GARP complex
112231312 (vps51)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec5
VPS51_Exo84_N
Dor1
Vps54_N
COG2_N
EXOC6_Sec15_N
COG5_N
YxiJ
Vps53_N
Sec8_N
TMTC_DUF1736
Occludin_ELL
COG4_N
DUF4239
Motif
Other DBs
NCBI-GeneID:
112231312
NCBI-ProteinID:
XP_024253770
LinkDB
All DBs
Position
LG33:35630683..35637738
Genome browser
AA seq
840 aa
AA seq
DB search
MDGDINATAPGTTPPDTDPARKRRVHGMLKLYYGLNEEGKTVDQAESMDPCDINGPHFDP
EVYLNKLRRECSLGELMDQETCMVKQIRSLDSDMQTLVYENYNKFISATDTIRKMKNDFK
KMEDEMDCLSTNMASITDFSARISGTLQDQHAQITKLSGVHTLLRKLQFLFELPARLNKC
LELQAYAQAVSSHRRARCVLQQYSHMPSFRGIQDDCHAIMDKLAQELRQKFRDGGSSAKD
LSECVELLLQLDEPAEELCDKFLSHAQSRLEADLLGLEAELRPPLSYGPTAVTDPYTGPA
HRLSVEPTAGSPTGPSSLNNPFLSPSSRTDILEFIDRGCNEFVSSLCLVIASYQELFVNR
PQEGELASKNIPQMAIGKLHAFVDALATRYFSLVERRIQEEKSVGDNSLLVRALDRFHRR
LQAVAKLLPGSAVPSQGTEIVVRAARERIKQYLAALQSFYLNSLTDVRQALAAPRLGGSS
AGVGSHLGGPATGKEAPASLPELLSTLSASILNQIKSVLASVHLFTAKDITFSNKPYFKG
DFCSHGVRESLVVNFIKFVCQSSRQFCESAGDRGGSTPPALLLLLSRLCLDYETSTITYI
LTLTDEQFLVQHHSPVTAVTALCGEAREAAQKLLNHYVKVQGLIISQMLRKSVETRDWVN
TIEPRNVRAVMKRVVEDTTSIDVQVGLLYEEGVRKAHSSDSSKRTFSVYSSSRQQTRYAP
SYTPSAPMDTNLLSNIHKLFSERVEIFSPVEFNKVSVLTGIIKISLKTFLECVRLRTFGR
YGLQQIQVDCHYLQMYLWRFVSDENLVHFLLDEIVGSTAHRCLDPAPMEQSVIEVICERG
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggacggggatattaatgctacggctccgggcaccaccccacctgacaccgacccagcg
cggaagcgcagagtgcacggtatgttgaagctctactacgggctgaacgaggaaggaaag
accgtggatcaagctgagtccatggatccttgcgatatcaacgggccgcatttcgatcct
gaggtttatctcaataagctcaggagagaatgttcccttggagagctgatggaccaggag
acctgcatggtcaagcagatccgctccttggacagtgacatgcagacattggtgtatgag
aactacaacaagttcatctctgccacagacacaatcagaaaaatgaagaatgattttaag
aagatggaggatgaaatggactgtctctctaccaacatggcttctatcacagatttcagt
gcacgcatcagtgggactcttcaggaccagcatgcacagatcaccaaactgtcaggagtc
cacactctcctgaggaagctgcagttcctgtttgagctgcctgccaggctgaataagtgc
ctggagctgcaggcctatgcccaggcagtgagctcccatcgtcgtgcccgctgcgtgctg
cagcagtacagccacatgccctccttcaggggcatccaggatgactgtcatgccatcatg
gacaagttggcacaggagcttaggcagaaattcagagatggaggttcgagtgcgaaagac
ctttcagagtgtgtggagcttctgctgcagctggatgagccggcagaggaactttgtgac
aagttcctgagtcacgcccagtcacgattggaagcagacctcctaggactagaagcggag
ctgagaccaccattgtcctatggacccacagcagtgacagatccctacactggccccgcc
cacagattgtcagttgaacccactgctggatctcccactggcccctcctctctaaacaat
cccttcctctctcccagctcaaggactgatattttggaattcatagacagaggttgcaat
gaattcgtcagcagcctttgcttggtcattgcctcgtaccaagagttgtttgtcaaccgt
ccgcaagagggtgagctggcctctaaaaacatcccacagatggctattggcaagctgcat
gcttttgtggatgcactagccacccgctacttctccctggttgagaggaggatacaggag
gagaaaagtgttggagacaactctctcctggtccgggctctggatcgtttccaccgcagg
ctccaggccgtggccaaactgctgcctgggtctgctgtgcccagccaggggactgagatc
gtagtgcgagcagccagggagaggatcaagcagtacttggcagccctgcagagcttctac
ttgaacagcctgacagacgtgaggcaggccctagcagcccctcggctgggtggaagctct
gccggagttgggtctcatctaggggggccagccactgggaaagaagctccggccagcttg
ccagagctcctctccactctgtctgcctccattctcaatcagatcaagtcagtcctggca
tccgtgcacctttttactgcaaaggacatcaccttctccaacaagccttacttcaagggg
gatttttgtagccacggtgtgcgtgagagcctggtggttaacttcattaagtttgtgtgc
cagtcctcgcgtcagttctgtgagagtgcaggagaccggggcggctctacaccccctgcc
ctcctactgctgctgtcacgcctctgcctggactatgaaacctccaccatcacctacatc
ctcaccctcacagacgaacagtttcttgtgcagcatcactctcctgtaactgcagtcaca
gctttatgtggagaggccagagaagcagcacagaagctactgaaccattatgtcaaggtt
cagggcctgatcatatcccagatgctgagaaagagtgtggagacacgagactgggtcaac
accatcgagccacggaatgtccgtgctgtgatgaagagagtggtggaggataccacctct
attgatgtgcaggtgggtcttctctatgaggagggggtgaggaaagcccacagcagtgac
tccagcaaaaggaccttctccgtctatagcagttcgaggcagcaaacccgctacgcccct
agctacacacctagtgctcctatggataccaatctcctgagtaatatacacaagctcttc
tctgagcgggttgaaatattcagtcctgtggagtttaacaaggtctctgtgttgacggga
atcataaagatcagtctgaagacattcctggagtgtgtccgcctgcgtacctttggtcgt
tatggcctgcaacagattcaggtggactgccactacctgcagatgtacctctggcgcttc
gtctccgatgagaacctggtccacttcctgctcgatgagatagtgggcagcactgcccac
cgctgtctggaccccgctcccatggagcagagcgtcatcgaggtcatctgtgagagaggt
taa
DBGET
integrated database retrieval system
