Oncorhynchus tshawytscha (Chinook salmon): 112231321
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Entry
112231321 CDS
T05605
Symbol
ehd1b
Name
(RefSeq) EH domain-containing protein 1b
KO
K12483
EH domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112231321 (ehd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112231321 (ehd1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112231321 (ehd1b)
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112231321 (ehd1b)
Exosome [BR:
otw04147
]
Exosomal proteins
Proteins found in most exosomes
112231321 (ehd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
Dynamin_N
EF-hand_4
EHD_N
MMR_HSR1
GTP_EFTU
EF-hand_1
EF-hand_7
Roc
AAA_16
AAA_22
EF-hand_5
PIN_5
EF-hand_6
AAA_28
AIG1
TsaE
Popeye
Motif
Other DBs
NCBI-GeneID:
112231321
NCBI-ProteinID:
XP_024253781
LinkDB
All DBs
Position
LG33:35703362..35727960
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AA seq
528 aa
AA seq
DB search
MFKRDGKKDPELFQNVSEGLKKLYRTKLFPLEDTYRFHDFHSPALEDADFDNKPMVLLVG
QYSTGKTTFIRHLMEQDFPGMRIGPEPTTDSFIAVMHGEQEGLIPGNALVVDPKKPFRKL
NAFGNAFLNRFVCAQMPNAVLESISIIDTPGILSGEKQRLSRGYDFAAVLEWFAERVDRI
ILLFDAHKLDISDEFSEVIRALKNHEDKMRVVLNKADQIGTQQLMRVYGALMWSLGKIVG
TPEVIRVYIGSFWAQPLLVPDNRKLFEAEEQDLFKDIQGLPRNAALRKLNDLIKRARLAK
VHAYIISSLKKEMPNMFGKDNKKKELIANLGEIYTRIEKEHQISPGDFPKLAKMQEILAN
QDFSKFQVVKPKLLEAVEDMLANDIAKLMTLVRQEEAAMPSQSVQGGAFEGTMNGPFGHG
YGEGAGEGIDELEWVVARDKPTYDEIFYTLSPVNGKVSGAMAKKEMVKSKLPNTVLGKIW
KLADVDKDGFLDDEEFSLANHLIKVKLEGHELPTDLPEHLIPPSKRGL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaagggatggcaagaaggacccagaactattccaaaatgtctctgaagggctg
aaaaaactgtacaggaccaaactctttccattggaagacacctaccgcttccacgatttc
cattcacccgctttggaagatgccgactttgacaacaagcctatggtgctcttggttggc
caatactctacaggtaaaaccacctttatccggcatctaatggagcaagatttccccggc
atgcggatagggcccgaaccgaccaccgactccttcatagcggtcatgcatggagagcag
gaggggctgatcccaggcaacgcactagtagttgaccccaagaaacccttcagaaaactc
aacgcttttggcaatgcttttcttaacaggtttgtgtgtgctcagatgcccaacgctgta
ttggagagcatcagcatcatcgacaccccaggaatcctgtctggagagaagcagaggctc
agcagaggttatgactttgctgcagtgctggagtggtttgcagaacgcgttgaccgcatc
atcctgctcttcgacgcccacaagctggacatctcagatgaattctctgaggtgatccgc
gccctgaagaaccatgaggataagatgcgggtggttctgaacaaggctgaccagattggc
acgcagcagctgatgagggtctatggcgccctcatgtggtctcttggtaaaattgttggc
actccagaggtgatccgggtgtatatcggttctttttgggctcagccgctcctggtccca
gacaaccggaagctttttgaggctgaggaacaggaccttttcaaggatattcaggggctg
cctcggaatgctgctctgaggaagctcaatgacctcatcaagcgggctcgcctcgccaag
gtccacgcttacattatcagctctctaaagaaggagatgcccaatatgtttgggaaggat
aataagaagaaggagctgatcgccaacctcggggagatctacacgaggattgagaaagag
caccagatctcacctggagacttccccaaactagctaagatgcaggagatcttggcaaac
caggacttcagtaagttccaggtggtgaagcccaagctgctggaggccgttgaggacatg
ctagccaatgacatcgccaaactcatgacactcgtccgccaggaggaggcagccatgccc
agtcagtcagtccaaggtggtgccttcgagggcaccatgaatgggcccttcggccatggc
tacggcgagggtgcaggtgagggcattgatgagctggagtgggtggtggcacgagacaaa
cccacctacgatgagatcttctacaccctgtctcctgtcaacggcaaagtgtctggtgcc
atggccaagaaggaaatggtgaagtccaagctgcccaacacagtgctggggaagatctgg
aagctggccgacgtagacaaggacggtttcctggacgacgaagagttttcccttgccaat
cacttgatcaaggtgaagcttgagggtcacgagcttcccactgacctgccagaacacctt
atccccccctccaaaaggggactgtag
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