Oncorhynchus tshawytscha (Chinook salmon): 112231323
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Entry
112231323 CDS
T05605
Name
(RefSeq) syntaxin-5
KO
K08490
syntaxin 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112231323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112231323
Membrane trafficking [BR:
otw04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
112231323
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Apolipoprotein
DUF16
ABC-2_memb_rel
Motif
Other DBs
NCBI-GeneID:
112231323
NCBI-ProteinID:
XP_024253784
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All DBs
Position
LG33:35746875..35755290
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AA seq
350 aa
AA seq
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MNTRRRHGPRNSQEGVYLGPAQTQSPLIQLQDPQLTAPSPPPPAPLVDISNMSGRDRTNE
FQSVCRSLQGRQNAVQSSKPALSAVRQRSDFTLMAKRIGKDLSNTFAKLEKLTILAKRKS
LFDDKAVEIEELTYIVKQDINSLNKQIAQLQGLVRSRQSQNGKHLQTHSNTIVVSLQSKL
ASMSNDFKSVLEVRTENLKEQKSRRDQFSQAPASSSHLHASNFGNSLLMQDDSKRTAEVS
IDMDFRASQQLQLVNEQDSYIQSRSDTMQNIETTIVELGSIFQQLAHMVKEQEETVQRID
ANVEDTQLNVDMAHSEILKYFQSVSSNRWLMVKIFLVLIVFFIVFVVFFA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgcgtcgtcgccacggtcctaggaacagccaggaaggggtgtacctagggcct
gcccagacccagtcaccgctgatccagttgcaggacccacaactcacagcccccagtcca
ccgccacctgccccactggtggacataagcaacatgtcgggcagggaccgcaccaatgag
ttccagtcagtctgcaggtcactacaggggagacagaatgcggtccagtccagcaagcca
gccctcagtgcagtcagacagcgcagtgactttacactcatggcaaagaggattgggaag
gacttgagtaacactttcgccaaactggaaaaactcacaatacttgccaaaaggaaatct
ctttttgatgacaaagctgtggagattgaggagttaacctacattgttaaacaggacata
aacagtctgaataaacagatcgcacagctgcagggtcttgtgcgctccagacagagtcag
aatggcaaacacctacagacacattccaacaccatcgttgtctccctccagtccaaactg
gcatcaatgtcaaacgacttcaagtcggtgctggaggtcaggacagagaacctcaaagag
cagaagagtagaagagatcaattttctcaagccccagcatcctcctcccatctacatgcc
agcaacttcggtaactcattgttaatgcaggacgactctaaaaggacagctgaagtctct
atagacatggacttccgtgccagccaacagctgcagcttgtcaatgaacaggactcgtac
atccagagccgttcagacaccatgcagaacatagagaccaccatcgtagagctgggctcc
atcttccagcagctggcccacatggtgaaggagcaggaggagacagtgcagagaattgat
gccaatgtggaggacacccagctcaacgtggacatggcacactccgagatcctcaagtac
tttcagtctgtctcatccaaccgctggctcatggtcaaaatcttcctcgtcctcatagtc
ttcttcatcgtctttgtggtcttctttgcttga
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