Oncorhynchus tshawytscha (Chinook salmon): 112231341
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Entry
112231341 CDS
T05605
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 4-like
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112231341
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112231341
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
SALM family
112231341
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112231341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
LRR_9
fn3
Ig_2
LRR_EndoS
LRR_14
LRR_LRWD1
LRRCT
Sp38
Motif
Other DBs
NCBI-GeneID:
112231341
NCBI-ProteinID:
XP_024253812
UniProt:
A0A8C8EYR6
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Position
LG33:36091885..36103751
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AA seq
921 aa
AA seq
DB search
MPKSKSQISHPYSAPPHSKSSRRPSPKQHSLKGVHPEINWLSPIELKPKVTSPSLRPPAC
SMTPQTVVWLAVVTCSCVFSALLGPGVSAGETWGMVSICPFHCVCRNLSESLSTLCVNKG
LLFVPPDIDRRTVELRLADNFILEVGRVDFANMSGLVELTLSRNTIHALKPLAFADLQSL
RSLHLDTNRLTVVGPKDLSGLTNLQHLIINNNQLTNVSTEAFDDFLQTLEDLDLSYNNLR
KVPWEAIQNMASLHTLNLDHNLLDHIAEGSFGELYKLARLDMTSNRLQTLPPDPLFSRSQ
TGVVSPTPYNTVISLSFGGNPLHCNCELLWLRRLIRGDDMETCATPVHLAGRYFWSIPEE
EFTCEPPLITRHSNKLWVLEGQRATLRCRAIGDPEPIIHWISPDDRIVANSSRVHSYYNG
TLDVLVTRARDDGAYTCIAINAAGEATALIDLKIIPLPHRGNNTVPLTSPRGDPGSSDIS
SGRRGAGRKGGGGVVTVKNATEGESGDGDASEHLVGVLGATATSAQVRWVLGRATGPYLV
WMYQIQYNCTADDALVYRILPPTSNAFLLKNLVSGADYSLCVLAIFDDGLSTLATTKVLG
CTQFSTKEDFPECRSLQAHFLGGTLTIMVGGVIVVMLLVFTVAMMVRHRVCGDCRDEGHY
PAHHHDNFLPSKGEVDVYAQTNGNGRVMMVALPKGILGQKAKPLPSKTKPQAKNKPRATL
DSDQLSGERTAEEQGLEVGVRGKRFPPFTPESERVTLYYSPAITSQTLPLPRAHKSLRHS
GKLKLRRSEERERDLNKMVGSRCSLDSGAQGEEEGRLDDWRGGDRPPLGRTRSCSFDVGE
ITTTTCYSYAKRLSVIWTRRSQSVHGMLVQCASTASSASSMGSDQQPPALTHGYLHAFNT
SNSNSNTRVAAKAGDLEESVV
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaatccaaatcacaaatatcacacccatactcagctccaccccactcaaaatcc
tctcggaggccctctccaaagcaacactctctaaaaggggtccacccggaaataaactgg
ttatctcctattgaactcaagccaaaagtcaccagcccttccctgagaccccctgcctgc
tctatgaccccacagactgtagtctggctggccgtggtgacctgctcctgtgtgttctct
gctctgctgggcccgggcgtgtccgctggagagacctggggcatggtctccatctgtccc
ttccactgtgtgtgccgaaacctctcagagtctctgagcacgctctgtgtcaacaagggc
ctgctgttcgttcctcctgacattgaccggcgcacagtggagctccgtctggctgacaac
ttcatcctggaggtgggcagagtggacttcgccaacatgtcaggcctggtagagctaact
ctgtccaggaacaccatccatgccctgaaacctctggccttcgctgaccttcagagcctg
cgttcacttcacctggacaccaaccggctgaccgtggtggggccaaaagacctgtccggc
ctaactaacttgcagcacctcatcatcaacaacaaccagctgaccaacgtctccaccgag
gcatttgatgacttcctgcagacgctggaggatctggacctgtcctacaacaacctgagg
aaggtcccctgggaggccatccagaacatggccagcctgcacaccctcaacctggaccac
aacctcctggaccacatcgctgagggctccttcggagaactgtacaagctggctcgtctc
gacatgacgtccaaccggctgcagactctgccccctgaccccctgttctcccgctcccag
acaggcgtggtcagccccaccccctacaacactgtcatcagcctgagcttcggtgggaac
cccctgcactgtaactgtgagctgctgtggctgaggcggctgatccgcggggacgacatg
gagacgtgcgccactcccgtccacctggctgggcgctacttctggtctattccagaagag
gagttcacctgtgagcctccgctcatcacgcgccactccaacaagctgtgggtgctggag
ggccagagggccacactgaggtgccgtgccattggagacccagagccaatcatccactgg
atctcccctgacgaccgcatagtagccaactccagccgtgtgcactcctactacaacggc
accctggacgtgctggtgacccgtgcccgagacgatggggcatacacctgcattgccatc
aatgctgccggggaggctacagccctgatagacctgaagatcatccccctccctcaccgc
ggcaacaacactgtccccctaaccagccctcgaggggaccctgggtcatcagatatctcc
agtgggagaagaggggcaggccggaagggtggtggaggggtggtgactgtcaagaacgcc
acagagggagagagtggagatggagatgccagtgagcatttggtgggggtcctgggagcg
actgccacctctgcccaggtgcgctgggtcctgggccgggccactgggccgtacctggtg
tggatgtaccagatccagtacaactgcactgcagacgacgccctggtgtacaggattctg
cctcctacaagcaacgcgttcctgctaaagaaccttgtgtctggagctgactacagcctt
tgtgtcctggccatctttgacgacgggctgtccaccctggccaccaccaaggtcctgggt
tgcacccagttcagcaccaaggaggacttcccagagtgccgttccctgcaggcgcacttc
ctgggtggcacactgacaatcatggtgggcggggtcatcgtggtgatgctgctggtgttc
accgtggcgatgatggtgaggcaccgcgtctgtggagactgcagagacgagggtcactac
cctgcccatcaccatgacaacttcctgccctccaagggagaagtggacgtttacgctcag
accaatgggaatgggagagtgatgatggtggctctgcccaaaggcattcttggccaaaag
gctaagcccctgccatcgaaaaccaaaccccaagccaagaacaagcccagggcaacgcta
gactctgatcagctcagtggagagagaacggctgaggagcagggcctggaggtgggcgtg
agggggaaaagattcccccctttcacccctgagagtgagagagtgacactgtactattcc
cctgccatcacctctcagaccttaccccttcccagagctcacaagtccctgagacactca
ggcaagctcaagctgcgccgctctgaggagagggagagagacttgaacaaaatggtgggc
tccagatgcagcctggactctggagcccagggggaggaggaggggcggttggatgactgg
aggggcggcgatcgtccgccactcgggaggacacgcagctgctcctttgatgtgggcgag
atcaccacaacaacctgctacagctatgccaagcgactgagtgtgatatggaccaggagg
agccagtcggtgcacggcatgctggtccagtgcgcctcaacggccagttcagcgagcagc
atgggcagtgaccaacagccccctgctctcacacatggctacctgcacgccttcaacacc
tccaactctaactctaacaccagagtggctgccaaagctggagacctggaggagagtgtt
gtgtag
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