Oncorhynchus tshawytscha (Chinook salmon): 112231361
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Entry
112231361 CDS
T05605
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112231361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
otw03009
]
112231361
03032 DNA replication proteins [BR:
otw03032
]
112231361
Ribosome biogenesis [BR:
otw03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
112231361
Prokaryotic type
112231361
DNA replication proteins [BR:
otw03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
112231361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
UPF0113
PUA_elF2D
DUF908
Motif
Other DBs
NCBI-GeneID:
112231361
NCBI-ProteinID:
XP_024253853
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All DBs
Position
LG33:complement(36869339..36876810)
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AA seq
500 aa
AA seq
DB search
MADVQMNSAKKQKKKEKTVAVDDVGDIQESGDFLIKPESRVASLDTSQWPLLLKNFDKLN
IRTAHYTPLPNGSNPLKRNIQDYVRTGFINLDKPANPSSHEVVAWIRRILRVEKTGHSGT
LDPKVTGCLIVCVDRATRLVKSQQSAGKEYVGIVRLHNAIENEHTLARGIETLTGALFQR
PPLIAAVKRQLRVRTVYESKLIEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQM
QELRRVRSGVLGERDNLVTMHDVLDAQWQYDHNKDETYLRRVIYPLEKLLISHKRLVMKD
SAVNAICYGAKIMLPGVLRYEDGIEINQDIVVITTKGEAICIATALMTTAVISTCDHGVV
AKIKRVIMERDTYPRKWGLGPKASQKKMMIQKGLLDKHGKANGSTPSNWKEGYVDYSASK
SKADGNGEAKRKRKDSDSDAAAPSAPSTPSGEEKKEKKKKKKEKKQKLEADTEPAAETDG
EVGESAKKKKKKKKKEAEAE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtacaaatgaactctgcgaaaaagcagaagaagaaggaaaagacagttgct
gttgatgacgttggggatattcaggagagtggagatttcctcatcaaaccagagtccaga
gttgctagtctggacacatctcaatggcctttgctgctaaaaaattttgacaaactcaac
atcaggacagctcactacacacccttgccaaatggctccaaccctctgaagaggaacatt
caggattatgtcaggactggcttcatcaacttggataagcctgccaatccctcctctcat
gaggtggtggcctggatccgacgtatcctgcgagtggagaagactggccacagtggcacc
ctggaccccaaggtgacaggctgcctcattgtgtgtgtggacagagccacacgactggtc
aagtcccagcagagtgcaggcaaagagtatgtgggaattgttcggctgcacaatgctatt
gagaatgagcacacacttgctaggggtattgaaacccttacaggagctttgttccagcga
ccaccactcatcgcagctgttaagcggcagttgagagttaggaccgtttatgaaagcaaa
ctcattgagtatgacccagagaggagattaggtattttctgggtgagctgtgaggctggg
acctacatcaggactctgtgtgtccacctggggctcctcctgggtgttggtggtcagatg
caggagctgaggagagttcgctctggtgttctgggagagagggacaatttggtgaccatg
cacgatgtgctagatgctcaatggcagtatgaccacaacaaggacgagacgtaccttcgc
agagtcatctacccactggaaaagcttctaatatctcacaagcgtctggtcatgaaagac
agtgcagtgaatgcgatctgctatggcgcaaagatcatgctgcctggtgtcctgcgatat
gaggatggcattgagatcaaccaggatattgtggttataacgaccaaaggagaggccatt
tgtatagctactgccctcatgacgactgcagtgatctccacatgtgaccatggggtggtg
gccaagatcaagagagtcatcatggaacgagacacctatccccgcaagtggggcttaggc
ccaaaggccagccagaagaagatgatgatccagaagggtctgctggacaaacatggcaaa
gccaacggcagcactccatcgaactggaaggagggctacgtagattacagtgcgtccaaa
tcaaaggctgacggaaatggtgaagcaaagaggaagcgcaaagacagtgacagtgatgca
gcagcaccctctgctccttccactccgtcgggagaagagaagaaagagaagaagaagaaa
aagaaggaaaagaagcagaaactagaagctgatacggagccagcagcagagacagacgga
gaggttggtgagagtgccaagaagaagaagaagaagaaaaagaaggaagcagaagcagag
tga
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