Oncorhynchus tshawytscha (Chinook salmon): 112231401
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Entry
112231401 CDS
T05605
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112231401
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112231401
Surveillance factors
Other surveillance factors
112231401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
112231401
NCBI-ProteinID:
XP_024253904
UniProt:
A0A8C8CER8
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All DBs
Position
LG33:complement(37169027..37202866)
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AA seq
1057 aa
AA seq
DB search
MTAETLNFGPECCLGEDNGRCISNLNLRLRALSRGRSVTSPPPSPALPKSKLADYRYGRE
EMLALYIKDDKPPEDITQDKEFAAILQDEPVQPLALEPLTEEEQRNFSMSVNSVAVLRLM
GKGGGAAPAGVAKGRGGGIRGRGRGEGAFYQRAPGGPDDGEVGFGRGREMLRSQSWDDRA
ERPKFEKPIRRAEVVRPGFEEAGPLGRKDSWRADSGNWRTLREEEEEAAAGGGGEQPAWR
VAGTRRDDGGPRSAGWRDHGGRRKFEFDFRDSEGPRREDDRDGLPEWCTDEEDGEMGTFD
SSGAFMCIKKGSKGTITEEDLEFEALEEDENGQEVKDNSQEGKDNYKDNYTDGDECEAAC
EGVVKYRTPSPPAVSAPPSSDPLPAPCAPEAPVVPISHPSKTNHVPTQGSSPPGSGAQLS
PDPSSSTTTFSSLMPPPSFGSLLPSTGGEVEEDEGMKHLQQEAEKMVASLQDTSLEEECF
TQALQESHNITSQSLTHPAPHSHTHTHTAGHTHSHSAHRDCALPLSHEAAMKWFYKDPQA
EIQGPFSTVEMCEWFQAGYFSMTLLVKRGCDEGFQPLGDVIKMWGRVPFSPGPSPPPLLV
RQPPPPRGSSGNMDQELLKKQLEQAATAALYQQLQIRFQHMNRSGESSMMNRSMSVPDNG
SMWDMRTSASQQSGGEANLWDLTMSHSTQGPSLEQLQKLQDRREAELRAKREEEERKRRE
EKRRQQEEQKRRDEEELYRRKQQCRQQQELILKLLQQAQPGGPGCISGSGSGTVWSGPQV
SALSKQGKSLSLLELETERLLKQQAQHQRAQQQRDRHGGLSMGQWGEGSVGMWSGGGMEP
KGSSGGMGVWEEAVKNQNSLRNMGMKNSRSSPSLSEQYMLRKKRTEEEDKLLKLLQGMKP
QDGFTTWCEQMLHALNTSTNNSPSSSLDVATIVAYLKEVESPYEVLDFIRSYLGDTVEAK
EFAKQFLERRAKQKANHQRQQQQLSKEVPGLSLNNFPLQSMFQAAQMGKGGMYDSQAAKM
KKKQTMMLHSDPSILGYSFLGAGDRMSLGEMETVEDY
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgaaacacttaacttcggcccagaatgttgtctaggggaagataatgggcga
tgcatatccaacttaaacttgaggctccgtgcactatccagagggcggagtgtgacgtcc
ccccctccctctccagcattgccaaagtccaagctggccgattaccgctatggtcgtgag
gagatgctagcactttatatcaaagatgacaaacccccagaggatatcacgcaggataag
gagtttgctgctatcctgcaggatgagcctgtgcagcctttggcactggagcctctaact
gaggaggagcagagaaacttctccatgtctgtcaacagtgtggctgtgctgaggttgatg
ggaaagggaggcggggccgcccctgcaggtgtggccaagggtcgtggaggaggcatcaga
gggagaggaagaggtgaaggtgcattctaccaaagagctcctggaggtcctgatgatgga
gaggtgggcttcggtcgtggccgagaaatgctccgcagccaaagctgggatgaccgagct
gagaggcccaagtttgagaagccaatcaggcgtgctgaggtagtgcgtccagggtttgag
gaggcgggacctcttggcaggaaggactcctggcgtgcagacagtggtaactggcgtacc
cttcgggaggaggaggaagaggcagcagcaggaggagggggagagcagccagcctggaga
gttgcaggaacccgccgtgatgatgggggtcctcggtctgcaggctggcgtgatcatggg
ggccggaggaagtttgagtttgacttccgtgacagcgagggcccccgcagggaggacgac
agggacggccttcctgagtggtgcactgatgaagaggatggagagatgggcacctttgat
tcctcgggggccttcatgtgcatcaagaaaggctccaagggcaccatcactgaagaggat
ctggagtttgaagctctagaggaagatgagaacggtcaggaagtcaaggacaacagtcag
gaaggcaaggacaactataaggataactacactgacggagatgagtgtgaagcagcatgt
gagggggtggtcaagtacaggactccatctcctcctgctgtctcggcccctccctcctca
gaccctctccctgccccctgtgccccagaggctcccgtggtacccatctcccacccctcc
aaaaccaaccacgtgcccactcaaggcagctcacctccagggagtggtgctcagctcagt
ccagacccttcctcctctaccaccactttctccagcctgatgcctcctccctcctttgga
tctctcctcccatcaacagggggagaagtggaggaggatgagggcatgaagcacctgcaa
caggaggctgaaaagatggtggcatctctgcaggacacatcccttgaggaggagtgtttc
actcaagcactgcaggagagccacaacattacctcccaatctctcacacacccagcccca
cactcacacacacacacacacaccgctggacacacacactcccactctgcccatagggac
tgtgccctgcccctctcccacgaggcagccatgaagtggttctacaaggacccccaggca
gagatccaaggtcccttctccactgtggagatgtgcgagtggttccaggcaggctacttc
tccatgacactgctggtaaagagaggttgtgatgagggcttccagcccctgggtgacgtc
atcaagatgtgggggcgtgtgcccttctcccccggcccctcccccccacccctgctggtg
agacagcctccaccacctcgggggtcctctggcaatatggatcaggagctgctgaagaaa
cagttagaacaagcagccactgcagctctataccagcagttgcaaataaggtttcagcac
atgaacaggagtggggaatctagcatgatgaacaggtccatgtcagtaccagataatggg
tctatgtgggacatgcgtacctcagcctcccagcagtcaggaggtgaggcaaacctatgg
gacttaaccatgagtcattccactcaggggccatctctggagcagctacagaagctccag
gaccggcgtgaggctgaactcagggccaagcgagaggaggaagagaggaagcgtcgggag
gagaagaggaggcagcaggaggagcagaagaggcgtgatgaggaggagctgtacaggcgt
aagcagcagtgtcggcagcagcaggagctgatcctgaagctgctgcaacaggcccagccc
gggggcccagggtgtatctctgggtcagggtcagggactgtgtggagtggcccccaggtc
tcagcgctctccaagcaaggcaagagcctcagcctgctggagctggagaccgagaggctg
ctcaaacagcaggcccagcaccagagggcccagcagcagagggacaggcatggaggcctg
tctatgggtcagtggggtgaggggtctgtgggcatgtggtctggtgggggcatggagccc
aaaggcagctctggaggtatgggtgtctgggaggaggctgtgaagaaccagaacagcctc
cgcaacatgggcatgaagaacagccgcagcagcccctctcttagcgagcagtacatgtta
aggaagaagcgtacagaggaggaggacaaattgctgaagctgctgcagggcatgaaaccc
caggacggcttcaccacctggtgtgaacagatgctgcacgcgctcaacacctccactaac
aactctccctcctcgtccctggatgtagccaccatcgtggcctatctgaaggaggtggag
tctccctacgaagtccttgactttatccgctcctacctgggcgacactgtggaagccaaa
gagtttgccaagcagttcctggagcggcgtgccaaacagaaagccaaccaccagaggcag
caacagcagttatcaaaagaagttccaggactgtccttgaacaactttcctctacagtcc
atgttccaggcagcccagatggggaagggaggaatgtatgacagccaagctgcaaagatg
aagaagaaacagaccatgatgcttcactccgaccccagcatcttaggatattcattcctg
ggcgcaggggacaggatgagcctgggcgagatggaaacagtggaagattattga
DBGET
integrated database retrieval system
